New model in OGS2.0 | DPOGS208854  |
---|---|
Genomic Position | scaffold2505:- 8663-9187 |
See gene structure | |
CDS Length | 525 |
Paired RNAseq reads   | 1 |
Single RNAseq reads   | 7 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012527 (1e-24) |
Best Drosophila hit   | CG30491 (7e-21) |
Best Human hit | retinol dehydrogenase 14 (1e-19) |
Best NR hit (blastp)   | PREDICTED: similar to RDH13 [Strongylocentrotus purpuratus] (2e-32) |
Best NR hit (blastx)   | hypothetical protein LOC100141353 [Danio rerio] (2e-26) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity GO:0055114 oxidation reduction |
InterPro families    | IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain |
Orthology group | ND |
Nucleotide sequence:
ATGCAAGTTAATTACTTCAGTTCATTTCTTTTAACATCGCTTCTACTCCCTTTATTAAAA
GCATCAGCACCGAGTCGAATAATTAACGTTTCATCAATTGTGCACTTTTATGGGAGAACA
GACTTAAATAATTTAAACACGGAATACAGTGGTATTTTTAATTCACACATAGTTTACGCT
ACTGCAAAGCTCTGTTTGCTACAAATGACTATGGAATTAAATCGCAGATACAAGTTCACG
GGCTTAACAGCGTACGCTCTTCATCCTGGAGTTGTAAACACGGAAATGGTTCAACACTTA
AATTCGTGGTTCATTAGAAATGTTTTAAAAATTTTTCAAACATTCCATAAAACACCATGG
GAAGGAGCACAAACTACGATATATTTAGCTGTATCGCCTGAAATCAATAAGAGTGGATTT
TTTTTCAAAGATTGCCGCGAAGCGAGATCTAGTAGAGCTGTACAAGATTTGGAGAGTGCC
ACTAAACTATGGGAGCTTTCAGAAAGGTATGTAAATTTGAAATGA
Protein sequence:
MQVNYFSSFLLTSLLLPLLKASAPSRIINVSSIVHFYGRTDLNNLNTEYSGIFNSHIVYA
TAKLCLLQMTMELNRRYKFTGLTAYALHPGVVNTEMVQHLNSWFIRNVLKIFQTFHKTPW
EGAQTTIYLAVSPEINKSGFFFKDCREARSSRAVQDLESATKLWELSERYVNLK