| New model in OGS2.0 | DPOGS214260 |
|---|---|
| Genomic Position | scaffold680:- 38580-43597 |
| See gene structure | |
| CDS Length | 672 |
| Paired RNAseq reads | 2541 |
| Single RNAseq reads | 8498 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005977 (2e-108) |
| Best Drosophila hit | CG3244 (6e-93) |
| Best Human hit | ND |
| Best NR hit (blastp) | C-type lectin 5 [Bombyx mori] (4e-119) |
| Best NR hit (blastx) | C-type lectin 5 [Bombyx mori] (1e-116) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR018378 C-type lectin, conserved site IPR001304 C-type lectin IPR016187 C-type lectin fold IPR016186 C-type lectin-like |
| Orthology group | MCL16505 |
Nucleotide sequence:
ATGCAAGCGTGGCTGGTGGCAGCTTGCGCAGTAATGCTTGCGGCGTTGGCAGCGGCTCAG
AAACCTGGCAGGTTCCTCTCATTACCGGTGCCACAGAAATGCGCAAACCGACCAAAAGAA
TTCTTCTATCGTGGTCACAACTATTTCTACAGCGGTCACGTTCCTGAACTAGCAAACAGG
AAAGTTGACTGGCTGGATGGACGCAACATCTGCCGAGAATACTGCATGGATCTCGTGTCC
ATGGAAACACAAGAGGAAAATAATCTAATCTTCAAGCTTATCCAACAAGGTGACGTGCCG
TACATCTGGACTTCTGGTCGTCTTTGCGACTTCAAGGGTTGCGAATCCCGCAAAGATTTG
GAACCTAAAAACTTGCTCGGATGGTTCTGGTCTGCTAACCGTGAAAAGATTGGACCTACC
AATCAGATTCCCAACGGCTGGGGCTACAACCCTTGGTCACAAACCGGTCACAAGAAGCTA
CGTCAGCCAGACAATGCGGAGTTCGACATCAATGGCACATCAGAGTCTTGTCTCAGCATC
CTCAACAATGTTTATAACGACGGTATCGCATGGCACGACGTCGCCTGTTACCACGAGAAA
CCCATCGTCTGTGAGGACTCTGACGAACTCCTCAATTACGTAGCCAGCACCAACCCCGGC
ATCCGTCTGTGA
Protein sequence:
MQAWLVAACAVMLAALAAAQKPGRFLSLPVPQKCANRPKEFFYRGHNYFYSGHVPELANR
KVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQGDVPYIWTSGRLCDFKGCESRKDL
EPKNLLGWFWSANREKIGPTNQIPNGWGYNPWSQTGHKKLRQPDNAEFDINGTSESCLSI
LNNVYNDGIAWHDVACYHEKPIVCEDSDELLNYVASTNPGIRL