| New model in OGS2.0 | DPOGS214263 |
|---|---|
| Genomic Position | scaffold680:- 3053-7312 |
| See gene structure | |
| CDS Length | 639 |
| Paired RNAseq reads | 2742 |
| Single RNAseq reads | 10086 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014360 (2e-38) |
| Best Drosophila hit | CG8399 (8e-15) |
| Best Human hit | ND |
| Best NR hit (blastp) | RecName: Full=Putative defense protein Hdd11-like; Flags: Precursor (4e-44) |
| Best NR hit (blastx) | RecName: Full=Putative defense protein Hdd11-like; Flags: Precursor (5e-43) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005576 extracellular region GO:0042832 defense response to protozoan |
| InterPro families | IPR002861 Reeler domain |
| Orthology group | MCL18975 |
Nucleotide sequence:
ATGACCGCTTGCCCTTCCAAAGCACTAGGAGCTAAGGCGATATATAGCTTTAAATTGCCG
AGGTCGCTACGTTCTGATCCACTCACGCATTGCGAGACCTGCGCCGCGGTCCGATTTGAA
CTTAAAGTTTCCAAGATGTTCTTTTCATTTTTCGTAACAATACTGGCCGTTGTCGCATAT
ACGGAGGGCTTTTCCCATGGGGCTCCAGAGAGTGCCTGCCGGGACTTAATGCCAAGACAT
CAAGATCATAAGCCCCAGACAAGTCCACCACCATACGCCATCACCACCAGCGTTAGGGAA
CTTAAGGCTGGCGACTCCATGCGAGTGACTGTCGAAGGGAAAACACCTGCAAACTTGATC
CGCGGCATCATGCTGCAAGCGCGCGCTGGCGATGACATCGTTGGACTCTTCAAACTCGAC
CCCAACGACTCTTTCTCCCAGCTTATGAACTGCGGAGTTTTAGGCGACACAATCACGCAT
AAGAAGCATGATAACAGCCAAGACAAACAAACTCTCACTTACACATGGACTGCTCCAGCC
AACTTGAACGATAAAATTGTAGTCGGAGCAACAATTGCACTCAACAAATCTACCTTCTGG
GTTGATGTTAAATCTGCTCCTGTTAAAATAATGCCATGA
Protein sequence:
MTACPSKALGAKAIYSFKLPRSLRSDPLTHCETCAAVRFELKVSKMFFSFFVTILAVVAY
TEGFSHGAPESACRDLMPRHQDHKPQTSPPPYAITTSVRELKAGDSMRVTVEGKTPANLI
RGIMLQARAGDDIVGLFKLDPNDSFSQLMNCGVLGDTITHKKHDNSQDKQTLTYTWTAPA
NLNDKIVVGATIALNKSTFWVDVKSAPVKIMP