DPGLEAN03463 in OGS1.0

New model in OGS2.0DPOGS215714 
Genomic Positionscaffold951:+ 116022-126611
See gene structure
CDS Length984
Paired RNAseq reads  572
Single RNAseq reads  1483
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA005808 (3e-106)
Best Drosophila hit  CG2254 (8e-76)
Best Human hitepidermal retinol dehydrogenase 2 (1e-45)
Best NR hit (blastp)  short-chain dehydrogenase [Culex quinquefasciatus] (5e-89)
Best NR hit (blastx)  short-chain dehydrogenase [Culex quinquefasciatus] (4e-85)
GeneOntology terms


  
GO:0016491 oxidoreductase activity
GO:0055114 oxidation reduction
GO:0005488 binding
GO:0005811 lipid particle
InterPro families


  
IPR020904 Short-chain dehydrogenase/reductase, conserved site
IPR002198 Short-chain dehydrogenase/reductase SDR
IPR002347 Glucose/ribitol dehydrogenase
IPR016040 NAD(P)-binding domain
Orthology groupMCL10489

Nucleotide sequence:

ATGCTAAACGGTTTATTGGGATCGGTAAGTCAGCTTGTGGCGAAGAACACACGTTCAGAG
CGACACATGGATTTTCAAGGAGCTCTACAAGTCGTGTTCGACTTACTATGGACTTTGATA
AAGGTCAATTATTTGACGGTGGTCGGCATGTGGCGAACCATAATGCCACCAGATCCAAAG
GATGTACGGGATGAAGTCGTTCTCATCACGGGTACCGGTCATGGCATCGGTCGTGAGATG
GCGTTGCGGTTCGCAAGACTCGGAGCTACCCTGGTGTGTGTCGACATCAACGCCTCCACC
AACGAGGAAACCGTCAGGATCATCAAACAGGAGAAGAATAAGGCATTCAGTTATCAGTGT
GACGTCACCGATCGCGCTGCAGTGATGCAAATGGCTGAAAAAATCCGTCATGAAGTTGGC
GAGGTGTCGATCCTCGTGAACAACGCTGGGATCATGCCCTGCAAGCCGCTCCTTAACCAG
ACGGAGAAAGAAATAAGACTGATGAACGACATCAACGTCAACGCTAACCTATGGATGATC
CAAGCTTTTCTTCCATCAATGATGGAGAGGAACCACGGTCATATAGTGGCGATGTCCTCT
ATGGCGGGGCTGATGGGACTTCGCAACCTGGTTCCGTACTGTGGGTCAAAGTACGCAGTC
AGAGGCATCATGGAGGCATTGGCGATTGAACTCAAAGAGGATCCAAGAGAGTTTAGCGGG
ATTAAATTCACAACGATATGTCCATACATGGTTGACACTGGGTTATGCAAGAAACCTCGC
ATCCGGTTTCCTAGTCTGATGAAGGTGGTGTCTGCTAGTGAGACCGCTGACTTGATCGTT
GACGCTGTAAGGAGAGACATCTTGGAGATCACCGTCCCACAGGAACTGCACTTCATGAAC
AGATACATTTATCGTTTCCTACCGTTCCCCGCTGCCGTCGCTTGGAACGAGTTTTTCAAC
ACGGGTGTCGACTCCCACGAATGA

Protein sequence:

MLNGLLGSVSQLVAKNTRSERHMDFQGALQVVFDLLWTLIKVNYLTVVGMWRTIMPPDPK
DVRDEVVLITGTGHGIGREMALRFARLGATLVCVDINASTNEETVRIIKQEKNKAFSYQC
DVTDRAAVMQMAEKIRHEVGEVSILVNNAGIMPCKPLLNQTEKEIRLMNDINVNANLWMI
QAFLPSMMERNHGHIVAMSSMAGLMGLRNLVPYCGSKYAVRGIMEALAIELKEDPREFSG
IKFTTICPYMVDTGLCKKPRIRFPSLMKVVSASETADLIVDAVRRDILEITVPQELHFMN
RYIYRFLPFPAAVAWNEFFNTGVDSHE