New model in OGS2.0 | DPOGS208889  |
---|---|
Genomic Position | scaffold53:- 212195-213319 |
See gene structure | |
CDS Length | 558 |
Paired RNAseq reads   | 123 |
Single RNAseq reads   | 512 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002461 (5e-75) |
Best Drosophila hit   | CG30499 (8e-74) |
Best Human hit | ribulose-phosphate 3-epimerase isoform 1 (2e-60) |
Best NR hit (blastp)   | AGAP005080-PA [Anopheles gambiae str. PEST] (3e-77) |
Best NR hit (blastx)   | AGAP005080-PA [Anopheles gambiae str. PEST] (2e-74) |
GeneOntology terms    | GO:0005975 carbohydrate metabolic process GO:0004750 ribulose-phosphate 3-epimerase activity |
InterPro families    | IPR011060 Ribulose-phosphate binding barrel IPR000056 Ribulose-phosphate 3-epimerase IPR013785 Aldolase-type TIM barrel |
Orthology group | MCL15349 |
Nucleotide sequence:
ATGGATGGTCATTTTGTTCCTAACCTCACATTAGGACATCCTGTAGTGAAATGTCTCCGC
GGTAAAATAAAGGACGCTTTCTTTGAAACACACATGATGGTTTCAAATCCGGAACAGTGG
ATACTTCCTATGGCAGATGCTGGAGTTAATCAATATACATTCCATATAGAACCAGTAGAT
AATGTTGAAGAAGTTTGTAGGAAGGTCAGAGAAAACGGAATGAAGGTTGGAGTTGCAATA
AAGCCTGGAACATCTGTTACAGAAATAGAAAAGTATATATCTATATCAGACATGGTGCTT
ATAATGACAGTGGAACCAGGATTTGGGGGTCAAAAGTTTATGGAGAATCAGATGGAGAAA
GTGAAATATTTAAGAGATCATTATCCATTATTAGATATTGAAGTTGATGGGGGAGTCGGG
CCTTCAACTATTAATTGTTGTGCAACAGCAGGTGCAAACATGATAGTATCTGGAACGGCT
ATTATAGGATCCAATGACCAAGCATCAACCATTCAATTAATGAGAGATGCTGTACAACAG
GCCATTAATAAAAAATAA
Protein sequence:
MDGHFVPNLTLGHPVVKCLRGKIKDAFFETHMMVSNPEQWILPMADAGVNQYTFHIEPVD
NVEEVCRKVRENGMKVGVAIKPGTSVTEIEKYISISDMVLIMTVEPGFGGQKFMENQMEK
VKYLRDHYPLLDIEVDGGVGPSTINCCATAGANMIVSGTAIIGSNDQASTIQLMRDAVQQ
AINKK