| New model in OGS2.0 | DPOGS208891 |
|---|---|
| Genomic Position | scaffold53:- 191169-200016 |
| See gene structure | |
| CDS Length | 1473 |
| Paired RNAseq reads | 1086 |
| Single RNAseq reads | 2636 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010496 (2e-17) |
| Best Drosophila hit | relish, isoform C (2e-51) |
| Best Human hit | nuclear factor NF-kappa-B p100 subunit isoform a (2e-34) |
| Best NR hit (blastp) | nuclear factor NF-kappa-B p110 subunit isoform 1 [Bombyx mori] (1e-123) |
| Best NR hit (blastx) | Rel family protein 2B [Manduca sexta] (2e-117) |
| GeneOntology terms | GO:0016563 transcription activator activity GO:0006963 positive regulation of antibacterial peptide biosynthetic process GO:0010552 positive regulation of gene-specific transcription from RNA polymerase II promoter GO:0006955 immune response GO:0006967 positive regulation of antifungal peptide biosynthetic process GO:0005515 protein binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005737 cytoplasm GO:0005634 nucleus GO:0008063 Toll signaling pathway GO:0009617 response to bacterium GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0050829 defense response to Gram-negative bacterium GO:0007165 signal transduction GO:0045087 innate immune response GO:0019730 antimicrobial humoral response GO:0045089 positive regulation of innate immune response GO:0034198 cellular response to amino acid starvation GO:0043565 sequence-specific DNA binding GO:0010628 positive regulation of gene expression GO:0045429 positive regulation of nitric oxide biosynthetic process GO:0006964 positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria GO:0003677 DNA binding GO:0051607 defense response to virus GO:0048935 peripheral nervous system neuron development |
| InterPro families | IPR008967 p53-like transcription factor, DNA-binding IPR014756 Immunoglobulin E-set IPR011539 Rel homology IPR013783 Immunoglobulin-like fold IPR002909 Cell surface receptor IPT/TIG IPR000451 NF-kappa-B/Rel/dorsal |
| Orthology group | MCL15091 |
Nucleotide sequence:
ATGTCTACAAGTGAGCAAGATGTAAGCGATTCCAATTTGGAATCGCCGTTTTCGCAATCT
GATTCACCGTACAGTTCGCCGTCTCATCAGGTTCCACAGCTAGCCAACATAATTTCAGAC
TTATCATGTGCCGAAAATACAAATATGCCAAAAGGCAATATGCCATATCTCAGTATTGTG
GAACAACCGCAGAACCACTTTAGATTCCGATACAAAAGTGAAATGATTGGAACGCATGGT
TGTCTGTTGGGAAAGTCCTATGCCACAAGTAAATCCAAATCACATCCAACTGTTGAGCTA
AGAAACTATACTGGGAGGGCGCTTGTAAGATGTAGGTTAGCTAGGCATGATTCTACTGAT
GAACATCCTCATAAATTACTAGAGGAAGATCAGGATAGAGACGTCCATAGCTGGTTACCG
GAAAAAGGAAGCTATCGAGTTGCATTTAGGGGAATGGGTATAATACACACGGCGAAAAAA
GATGTTCCCGCACTATTATACAAAAGATACGCCTCAGAGAAACCAGAAACGGCCTTTAAT
GAAAATAAGCTAAGATTGAAATGCGAGAACGAGGCGAAGAATATTAATTTGAATATAGTC
AGATTGAAGTTCAGCGCTCACGATCCAAACACCGATGCTGAAATTTGTCCTCCAGTTTAC
TCAGAGTGGATACATAATATGAAGAGTGCAGCAACAAATGATCTTAAGATCTGTCGTATG
AGCCGCTGTTACGGCCGACCGAAAGGCAAAGAGGACGTCTTCATATTTGTTGAAAAAGTA
AATAAGAAAAACATAATGATAAAATTCTTCGAACTGGACAAATATGGAGAAAGGGTTTGG
TCTAAAATGGCGACTTTCTTGCAGAGCGACGTACACCACCAATACGGCATTGTTTTCAGG
ACACCAGAATACCATAACTTACATATTACGTCAGATGTGAAGGTATTCATAGAATTGGTT
AGACCGAGCGACGGCAGGACCAGCGAACCAAAGGAGTTCACATACAAAGCTGAAACTATA
TATATACAGAATAAAAAAAGGAAAGCTAACTCATCATTCTCCTCTATAGGAAGTTCAGGT
AGTTCAATAAAAAGTGTCAGTGACCTGCCAACAACTGTAGAGTATGCTAATCAATTCGGA
GAATTTAATAATATGACTAACAATGGCATTGAAGTAATGGACCATCCGCCGGTTGCGCCG
ATGTACCATTTCAAAGTACCCCAAAATCAAATAGCCCCAACAGAGGAGTCGATGATGGCG
GATGCTCTATTGCACTCGTATGTGGGTTCCAATCCCGTACAGTCCAAGGCTATGAGTCCT
CTCCTCAGTCAGCCGAACGTGCCCGAACCCCCCGTACTACAGCTCCACTCGTCTGAATTG
GACCGAGTTCTTGAACAAGACATTGATTTACTTAGTGAAGACAAAAAACGATTTTTCAGT
ACTGATCTCGGAGGTGGGTTTTGTATCGTATGA
Protein sequence:
MSTSEQDVSDSNLESPFSQSDSPYSSPSHQVPQLANIISDLSCAENTNMPKGNMPYLSIV
EQPQNHFRFRYKSEMIGTHGCLLGKSYATSKSKSHPTVELRNYTGRALVRCRLARHDSTD
EHPHKLLEEDQDRDVHSWLPEKGSYRVAFRGMGIIHTAKKDVPALLYKRYASEKPETAFN
ENKLRLKCENEAKNINLNIVRLKFSAHDPNTDAEICPPVYSEWIHNMKSAATNDLKICRM
SRCYGRPKGKEDVFIFVEKVNKKNIMIKFFELDKYGERVWSKMATFLQSDVHHQYGIVFR
TPEYHNLHITSDVKVFIELVRPSDGRTSEPKEFTYKAETIYIQNKKRKANSSFSSIGSSG
SSIKSVSDLPTTVEYANQFGEFNNMTNNGIEVMDHPPVAPMYHFKVPQNQIAPTEESMMA
DALLHSYVGSNPVQSKAMSPLLSQPNVPEPPVLQLHSSELDRVLEQDIDLLSEDKKRFFS
TDLGGGFCIV