| New model in OGS2.0 | DPOGS208892 |
|---|---|
| Genomic Position | scaffold53:- 174901-176916 |
| See gene structure | |
| CDS Length | 2016 |
| Paired RNAseq reads | 724 |
| Single RNAseq reads | 1744 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006572 (2e-22) |
| Best Drosophila hit | Ptc-related (2e-27) |
| Best Human hit | Niemann-Pick C1 protein precursor (6e-25) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | AGAP001468-PA [Anopheles gambiae str. PEST] (7e-158) |
| GeneOntology terms | GO:0008158 hedgehog receptor activity GO:0016020 membrane GO:0016021 integral to membrane |
| InterPro families | IPR000731 Sterol-sensing domain IPR003392 Patched |
| Orthology group | MCL17602 |
Nucleotide sequence:
ATGTCAGAGGTTGATCTCAATGAAGTAGGAAACTTAGTTGGTACAGAAGACTGGGTGACA
GTCCCATTAGCCATGTGGGAGAAAAAATATTTAAAATATGTGAGTAATTTATCATCACCA
AAAAATATAAAGTTTTTTTATGAAACAGGAGGAAGTTTTGCAGATATAAGTGGTGAAACA
ATGTTTAATGACATGGATAAACTATCTATAGGTATTATGTTAATGTTTTTTTATGTTGTG
ATGGCAGTTTCTCGCTTCAATTGGCTAGAGATTAGGTTGACATTAGGTGGTGTAGGTTTA
CTGAGTGTTGGTATGGCATATATTACTACTGTGGGCTGGTGTTCCTTGATTGGTATCCCA
TTTGGCCCTGTTCACTCATCATTACCATTTCTTCTTATGGGCCTGGGAGTAGATGATATG
TTTGTGATGAATGCATGTTGGAAAATAGTTTTGCAATCAGAGTCACACCGAAGTATTCCT
GTTAAAGTAGGTCATATGCTGAAGCATGCAGGTGTGTCAATAGTAATAACATCCTTCACA
GATATTGTTGCTCTATTGATAGGTGCCATAACAATTCTTCCTTCTTTGAAATCCTTCTGT
ATCTATGCTGCAGTTGGTGTATTTTTCATATTTTGTTATTCTGTCACTTTTTTTGTTGCA
GTTTTCACAATAGACATAAAAAGGATTCGTGATAAGAGAAATGGAATTATATTCTGTTAT
AAACATAATAATGATGTCAATGTATCATCAAAAACTACATTTTTCCAAAAGATTTTAGAA
AGTTTCTATAAAAATATTGTTTTTACTATTCCTGGTAAAGCCACAGTCATCTTATTTGTT
TTAATAGTAACAGGTGTTAATATAGCAGCTGTATTAAAATTGGAACAAAAGTTTGACCAA
AAGTGGTTTATTCCTGATGATACTTATTATAAACAATTTTTGAACACCCATGAGCACTAC
TATCCTGATGAAGGTTATCCAGCTATGGTTTTCTTAGGAGATATGGATTACTATAAAGAA
TTTAATAATTTGTACAATATGATACAGGTTTTACGGAATGAATCATATGTTACTGATGTT
GTCACATGGGTAGAAACTTTTCATGGATATGTCTTAAAGAATTTTAACCACAACTTACTG
AATTCAAGTTCTATTACAGAAGGCCAATTTCTAAATTATTTGTCCAGATTTATATACAGT
GGAGTTGGAGGTAGATTTCAAGTAAATTTTAAATTTTCGGGGCCACATGCTTGTGGTAAA
ACTATTGATAATATAAGGGCCACAACATTATCTTTTAGATTCACAAGTTTCAAGGGTCCT
CAGGAGTATATACCCGCAATGAATCATGTTAAAGACATTGTAAAATCTGCATCCATAGCT
ACTGGTGATGGTTACCGGAGCGTCTGGTCCAAGGCCTTCGCAAATTGGGTCACTGACGAG
ATTATAGCTGTTGAAGTGGAGAGAAACATAGAACTAGCATTGCTTTGTGTCATGCTCTGC
ACTGTGATATTAATTACAAATCTTCAAATGTGTTTATGGATATTCATTTGCGTTTTACTC
ACAATTGTAAATGTATTAGGAGGAATGCAACAGTGGGGTATGACAGTTGATATCGTGTGT
TGCATTGGTCTAGAACTTGCAATTGGTCTTTGTGTTGATTATGCTGCACACGTTGGGCAT
ACATTTTTAACTATGACCCAAGGCGATCGTGGCGAGAGAGCATACAACACAGTCACATCT
ATCGGCAGCGCAGTTCTGCTAGGCGGTGGTTCGACTTTCCTTTCTTTATCTCTTCTAAGT
ATGTCGAAAGCGTATACATTTCAATCTTTCTTTAAGATATTTTTGCTGGTAATACTATTT
GGTTTATTTAATGGCTTGTTATTTCTACCTGTCGTTTTATCATTAATAGGTCCAGCACCT
TACAAAAGTCGCGATGAAAACGTTTTGGAAGCTATAGAACTAAATGGTAAAACTCCTGAC
AATAAAAAAATGTTAGCTAAGCGAGTAGAGTCTTGA
Protein sequence:
MSEVDLNEVGNLVGTEDWVTVPLAMWEKKYLKYVSNLSSPKNIKFFYETGGSFADISGET
MFNDMDKLSIGIMLMFFYVVMAVSRFNWLEIRLTLGGVGLLSVGMAYITTVGWCSLIGIP
FGPVHSSLPFLLMGLGVDDMFVMNACWKIVLQSESHRSIPVKVGHMLKHAGVSIVITSFT
DIVALLIGAITILPSLKSFCIYAAVGVFFIFCYSVTFFVAVFTIDIKRIRDKRNGIIFCY
KHNNDVNVSSKTTFFQKILESFYKNIVFTIPGKATVILFVLIVTGVNIAAVLKLEQKFDQ
KWFIPDDTYYKQFLNTHEHYYPDEGYPAMVFLGDMDYYKEFNNLYNMIQVLRNESYVTDV
VTWVETFHGYVLKNFNHNLLNSSSITEGQFLNYLSRFIYSGVGGRFQVNFKFSGPHACGK
TIDNIRATTLSFRFTSFKGPQEYIPAMNHVKDIVKSASIATGDGYRSVWSKAFANWVTDE
IIAVEVERNIELALLCVMLCTVILITNLQMCLWIFICVLLTIVNVLGGMQQWGMTVDIVC
CIGLELAIGLCVDYAAHVGHTFLTMTQGDRGERAYNTVTSIGSAVLLGGGSTFLSLSLLS
MSKAYTFQSFFKIFLLVILFGLFNGLLFLPVVLSLIGPAPYKSRDENVLEAIELNGKTPD
NKKMLAKRVES