| New model in OGS2.0 | DPOGS200699 |
|---|---|
| Genomic Position | scaffold3270:+ 6767-10513 |
| See gene structure | |
| CDS Length | 717 |
| Paired RNAseq reads | 22 |
| Single RNAseq reads | 66 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008308 (6e-37) |
| Best Drosophila hit | connectin (7e-18) |
| Best Human hit | matrix-remodeling-associated protein 5 precursor (4e-09) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (1e-31) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (5e-29) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0016200 synaptic target attraction GO:0007413 axonal fasciculation GO:0007156 homophilic cell adhesion |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | ND |
Nucleotide sequence:
ATGGTCGGTAACTTAGCGTTTAGCGAGTTGTGGGGATTGAAAGAATTGATGTTAGATAAC
AACGGTATCGAATACATCTCAGAAAGGGCTTTCGGAGGACTAACACAGTTAAAGAAGTTG
ACCTTATCTGGGAACAAGTTGGCAACTTTCTATGATGACATTCTGGAAGATATGAGGAGT
CTTAGTGTCTTGGATCTGAGAGACAACCTATTGACGACAATATCATATGAAACCATACGG
CCCATTTTGAACAACGAAAAATCTCAGTCATCAGTAGTTTATTTGGATGGTAACCCACTT
AGCTGTAACTGCCGTTTATCTTGGATATATGTGCTCCGTAATGAAACTCAGGATACCACT
ATGAAGCATGCTCTTGAAAAAATATCTTGCGTCTCAGACCCCACAAATGATAGACGAATA
AGTGAACCAAAAGAGGAAGAGGTCGAAAATAGTAACATTTTAGCAGATGATCATTATGAC
TACTATGATAAAAGTGACGATTATAGTAATGACAAAGAAAAAACTAAAATAGGTACAGCC
ATTAGGCTGATAGATATACCCTTAGAGACTCTCCCTTGTCCGAAAGAATTAATGCAGTCG
ATTGAGGAAACGTACGGCCATCCAGTGCAAAATGAGATACGATTAAAAGCCTTCTCTAGA
GTTGGGAGAGATTTACCTAACTTTCTATTCTTCTTGACATTGTTACTATTATTTTAA
Protein sequence:
MVGNLAFSELWGLKELMLDNNGIEYISERAFGGLTQLKKLTLSGNKLATFYDDILEDMRS
LSVLDLRDNLLTTISYETIRPILNNEKSQSSVVYLDGNPLSCNCRLSWIYVLRNETQDTT
MKHALEKISCVSDPTNDRRISEPKEEEVENSNILADDHYDYYDKSDDYSNDKEKTKIGTA
IRLIDIPLETLPCPKELMQSIEETYGHPVQNEIRLKAFSRVGRDLPNFLFFLTLLLLF