| New model in OGS2.0 | DPOGS201087 |
|---|---|
| Genomic Position | scaffold3634:- 120-10863 |
| See gene structure | |
| CDS Length | 2853 |
| Paired RNAseq reads | 1497 |
| Single RNAseq reads | 3671 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007196 (2e-30) |
| Best Drosophila hit | ruby, isoform B (5e-92) |
| Best Human hit | AP-3 complex subunit beta-2 (3e-153) |
| Best NR hit (blastp) | PREDICTED: similar to ruby CG11427-PA isoform 2 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ruby CG11427-PA isoform 2 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005515 protein binding GO:0030117 membrane coat GO:0006897 endocytosis GO:0005215 transporter activity GO:0030137 COPI-coated vesicle GO:0005794 Golgi apparatus GO:0031410 cytoplasmic vesicle GO:0006892 post-Golgi vesicle-mediated transport GO:0030665 clathrin coated vesicle membrane GO:0008565 protein transporter activity GO:0006886 intracellular protein transport GO:0016020 membrane |
| InterPro families | IPR016024 Armadillo-type fold IPR017108 Adaptor protein complex AP-3, beta subunit IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal IPR011989 Armadillo-like helical |
| Orthology group | MCL11618 |
Nucleotide sequence:
ATGTCCGGTACAACATCATACAATAATGAGAAAGTGGTGCAAGGAGAAGTTGAATATCCT
GCTAGCGATCCGGCCTCCGGGGCTTTCTTTCAGCCAGATTATAAGAAAAATGAAGACCTG
AAGCTGATGTTGGACGGATCAAAAGACTCTCTCAAGTTAGAGGCCATGAAAAGAATTATT
GGCTTGATTGCAAAAGGAAGAGATGCATCCGACTTATTTCCAGCAGTAGTGAAGAATGTT
GTATCAAAGAATCTTGAAGTGAAGAAGTTGGTGTATGTGTACCTGGTCAGGTATGCAGAG
GAGCAACAGGACTTGGCGCTGCTATCAATCAGTACGTTTCAACGAGCTTTAAAGGATCCA
AACCAGTTGATCCGAGCCAGTGCTCTCCGAGTGTTATCATCGATCAGAGTGCCAATGATA
GTTCCTATCGTAATGCTTGCTATCCGGGACTCCGCCAGCGACATGAGCCCTTACGTTAGG
AAGACGGCAGCCCACGCTATACCTAAACTATATAGCCTGGATCCAGATCAAAAGGAAGAA
CTGGTGGCCATCATCGACAAGCTTCTATCGGACAAGGCCCCGCTAGTGGTCGGATCGGCT
GCTATGGCTTTTAACGAAGTCTGTGGGGACCGTATGAACTTGATACATAAGAGTTACAGG
AAGCTATGTCTGCTGCTAGCTGATGTGGATGAATGGGGTCAGTTAGCACTTCTGAATGTG
CTAACGTACTATGCCAAGACATGCTTTCCTGATCCCAACAATGAGAGCTGTTCCAGTGAC
AGCGACAACTCCTCGGGCCGTCACTCCCCTCGCGTGGAGGCCGACCTGCGTCTGGTGCTG
CGAGCGGCCAAACCACTGCTACAGAGCAGGAACTCCGCCGTGGTACTGGCGGTCGCGCAA
TTGTTCTATCACTGCGGACCAGTCCAGGAGATGCCGCCCGTGGCCAAGGCCATGGTTCGC
CTCCTGCGAGCGCCGTCCGAGATCCAGAGCGTGGTGCTGAACACCATCGCGTCTCTCACC
GTCTCCAGGCCGAGCCTGTTCGAGCCGTTCCTGAAGTCGTTCTTCGTGCGTACGTCGGAC
CCCACGCACATCAAGCTCCTGAAGCTGGAGATCCTCACCAACCTGGCCACGGAGACCAGC
TCGCCCGTGGTGCTGAGGGAGTACCAGACGTACGTCACCACCAGCGACAAGACCTTCGTG
GCCGCCACCATACAGGCCATAGGACGCCTGGCCGTCCGCATACACTCCGAGACGGAGACC
TGCCTCAGCGGCCTGCTGCACCTGCTGTCCAGCAAGGATGAGTGGGTGGTGTGCGAGGCG
GTGGTGGTGGTGAAGCGCGTGGTTTGCGGAGGGGCGAGTTCGGCGCGGGCCGCCGTCAGC
AGAGCTGCCAAACTGCTCCGATCAGACCGCCTGGCGGGCGGCGCTCGTGCGGCCGCGGTG
TGGCTGGTGTGTGAGCACGGGTCCCAACACGCGAGGGCCGCGGCCGTCCTCGCTCACATG
GCTGAAAGCTTCGCTGAGCAGGAGGAGCTGGTGAAGCTGCAGCTGCTGTCCCTGTCGGTG
AAGCTGTCCGTGACGCAGCCGGCCACGCGGCCCGTGTGCCAGTACGTGCTGTCTCTGGCG
CGCTACGACTCCAGCTACGACGTGAGAGACCGCGCCCGCTTCCTCCGCAGCTGCCTCGAG
GGACGCCTGGCCGAGTTCGCCAGAGAGATCTTCTGCCCGGACACGCCCAAGCCCAGCGTG
CAGGCGAACAACAAAGAGCGTACTCATTACACGGTGGGGTCTCTGTCTCAGTACATCGGG
TCGTGTGCGTGCGGCTACCGTCCGTTGCCGACAGCGCCCTCTGCGGACACGTGCGCCGCG
CTCCGGGACTCCGCCCCCGCTGAGACGGAGCCCGAGCGAGACATGGACCAACAGAAGAAC
AAGAGCTTCTACTCCGAGCCCGGATCCACGTCCTCCTCGTCCAGCTCCAGCAGCGAGGAG
TCCACAGACGAAGAGGATTCCAATGAGGCGGACGACAAACAAGAAAAAGCTAAACAAATC
AATAATTACAAATCCTCCTCATCCGGCACCAGTGACTCGGAGTCGGACAGCTCGTCCTCA
CAGAGCGACATCGACTCGGAGACTGATCACCAACAGGACGGAGAAGAAGGAGACGGGGCG
GACGGAGATGATAAGCCACCGAACAAACGGGAACCGGAAGTCAAAGAAAAGAACGACAAA
TCCAATCTGGAGCTGCTCCTTGAACTGGACGAAGTGGCGAGTTCGTTGCCCACCATGACG
CCCACGTGCGGGGGCTTCCTGTCACCCACCACGCCACAAACGGAGAATGAGGACGACTCC
ATAGTCCCCGTGGGTCCGACCCACGTGCCCGGCGAGGTCGAGCTGGTGTCCCGCGTGCGA
TGGTCCGGGCTGGGGGTCAGCCGTCGCTGGTTACGAGCGCCCCACCTGTACTCGGACAAG
ATGGTCGCCGTGCAGCTGAAATTCACAAACCACGGGCACGAAGACGTAGAGAATATACGA
CTCGAGAAAAAGGTCCTCCAAGGGGGGAGGCGCTCCATCCAGGAGTTCCCGGCGATTCCC
CGCCTCGCTCCGGGCTGCTCCACCACCGTCCTGCTGGGCATCGACTTCGCCGACACCATC
CACCCCATGGACTTCACACTCACCAGTTCCAACGGCTCCGTGAGCGTGTCCGTGAGCCCG
CCGGTGGGCGAGCTGGTGCGTGCCGTGCGCGTGTCGTCGGCCGTGTGGACCAAGACCTGC
AACGCTCTGCGAGGAATGAACGAGGTGAGCTACGCGAGCAGGGCTGTCAGTAGGGACCAT
TGGGAAGTGTTGCGACATATTATAAAACAATAA
Protein sequence:
MSGTTSYNNEKVVQGEVEYPASDPASGAFFQPDYKKNEDLKLMLDGSKDSLKLEAMKRII
GLIAKGRDASDLFPAVVKNVVSKNLEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDP
NQLIRASALRVLSSIRVPMIVPIVMLAIRDSASDMSPYVRKTAAHAIPKLYSLDPDQKEE
LVAIIDKLLSDKAPLVVGSAAMAFNEVCGDRMNLIHKSYRKLCLLLADVDEWGQLALLNV
LTYYAKTCFPDPNNESCSSDSDNSSGRHSPRVEADLRLVLRAAKPLLQSRNSAVVLAVAQ
LFYHCGPVQEMPPVAKAMVRLLRAPSEIQSVVLNTIASLTVSRPSLFEPFLKSFFVRTSD
PTHIKLLKLEILTNLATETSSPVVLREYQTYVTTSDKTFVAATIQAIGRLAVRIHSETET
CLSGLLHLLSSKDEWVVCEAVVVVKRVVCGGASSARAAVSRAAKLLRSDRLAGGARAAAV
WLVCEHGSQHARAAAVLAHMAESFAEQEELVKLQLLSLSVKLSVTQPATRPVCQYVLSLA
RYDSSYDVRDRARFLRSCLEGRLAEFAREIFCPDTPKPSVQANNKERTHYTVGSLSQYIG
SCACGYRPLPTAPSADTCAALRDSAPAETEPERDMDQQKNKSFYSEPGSTSSSSSSSSEE
STDEEDSNEADDKQEKAKQINNYKSSSSGTSDSESDSSSSQSDIDSETDHQQDGEEGDGA
DGDDKPPNKREPEVKEKNDKSNLELLLELDEVASSLPTMTPTCGGFLSPTTPQTENEDDS
IVPVGPTHVPGEVELVSRVRWSGLGVSRRWLRAPHLYSDKMVAVQLKFTNHGHEDVENIR
LEKKVLQGGRRSIQEFPAIPRLAPGCSTTVLLGIDFADTIHPMDFTLTSSNGSVSVSVSP
PVGELVRAVRVSSAVWTKTCNALRGMNEVSYASRAVSRDHWEVLRHIIKQ