| New model in OGS2.0 | DPOGS207675 |
|---|---|
| Genomic Position | scaffold165:- 48818-53249 |
| See gene structure | |
| CDS Length | 1422 |
| Paired RNAseq reads | 204 |
| Single RNAseq reads | 544 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008604 (2e-11) |
| Best Drosophila hit | meiotic central spindle (3e-37) |
| Best Human hit | zinc finger protein 239 (1e-54) |
| Best NR hit (blastp) | PREDICTED: zinc finger protein 836 [Bos taurus] (6e-60) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 836 [Bos taurus] (2e-65) |
| GeneOntology terms | GO:0005634 nucleus GO:0046872 metal ion binding GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | ND |
Nucleotide sequence:
ATGATCTCATATTGCACTAAAATTAAACCCAAAGAAGACGATCGTTTACCTCGAATAATA
TGTAAAGAATGTAGTCGCCAACTAAAAAGATGTTATTCTTTTAATGTTCAATGCGAGGAG
AGCGATAAAACACTAAAATGCTACTTAAACAATATATTAATAACACCTGCCCTTGAGACT
GATTCAAAAGATGTCAGTGATGAAATTAAAAGTGAAAATGTTGAAGTGAAGAATGAGAAT
TTCAATCTAATGCTGAGAGAAGATAATAGTTTAGAAAGAGATGTCAAATTAGAGCCATTT
CCTACCAATGAACAGGATGACAGCGTTTGGGATGCTGAGGACGATAATGTGTTACTCGGA
GAGATTAAATTAAAGAAAACATTAAAAGAATCAATTTCCAATGACAATAAATACTGGGAA
CAAAAAAATATTAACAATCATTTAAGTAAAGAGGAGAGGGTTTTAAAAGTTATTATCAAT
GGTGATGATTTACCAAAGAAGAAAAGGGGAAGGAAGAAAAAAGAATATGAAGCCGACAGT
AAAATACATCAATGCGACGTTTGCGGGAAGATACTGAGTACCAAGAGCAATTTGAAGGCT
CACAAAATATGTCACACTGATCTGAGACCGTACAAATGTGAATTCTGCCCTTCAGCATTC
AGAGGTCACAGCGCTTTGTTTCAACACAAGAAGGTTCACACGGGCGAGACTCCCTACCAC
TGCGAGTACTGCTCCAAACAGTTCAGTAGACGGACAGGGTTGGTCAACCACATCAGGGTT
CACACCGGTGAGAAGCTTTTCAACTGCACCATATGTTTCAAGAACTTTGTTCAGAGCGCC
CAGCTGTCTATACACATGAAACGGCACAAAGGTGACAAGACTTACCTATGTCAGGAGTGT
GGAAAAGGATTTCCAATAAAAGCTGACCTTAAAGTGCACCAACGAACTCACAATGGCGAA
AAGCCTTATTCCTGTCACCTTTGTGATAAAACTTTTGCTACATCCGGCAACCTTTCAATA
CATATCAGGATTCACAATAAAGAAGTCAGGTACAATTGCAAAGAATGTCATCGCGGTTTC
GTGACATGCAGCGCGTACAACGTCCATCTAAAAAGGCACAAAGGGCAAAGAGACTATCAT
TGCGAGTGTGGAAAAACGTTTTACACTTCGTCAGCTCTCAAACAACACAAGGTTGTTCAT
ACGGGAATCAAGAAATATCAATGCAAGATATGCGAAAGGAAATTCTCGCAAACCAGCCAT
TTGAGCCGTCATTTCAGAAGGGACCATTCTAAACCGAACTTGCCAATGCCGCCATCAGAT
CACTATAAAATAGTTTTGCCGGAGAACAAATGCGGCAATTTATTCAATATACAAAAAATG
GCACCAGACATTGACAGTGATAAATTGAAAGCGTCGGAGTGA
Protein sequence:
MISYCTKIKPKEDDRLPRIICKECSRQLKRCYSFNVQCEESDKTLKCYLNNILITPALET
DSKDVSDEIKSENVEVKNENFNLMLREDNSLERDVKLEPFPTNEQDDSVWDAEDDNVLLG
EIKLKKTLKESISNDNKYWEQKNINNHLSKEERVLKVIINGDDLPKKKRGRKKKEYEADS
KIHQCDVCGKILSTKSNLKAHKICHTDLRPYKCEFCPSAFRGHSALFQHKKVHTGETPYH
CEYCSKQFSRRTGLVNHIRVHTGEKLFNCTICFKNFVQSAQLSIHMKRHKGDKTYLCQEC
GKGFPIKADLKVHQRTHNGEKPYSCHLCDKTFATSGNLSIHIRIHNKEVRYNCKECHRGF
VTCSAYNVHLKRHKGQRDYHCECGKTFYTSSALKQHKVVHTGIKKYQCKICERKFSQTSH
LSRHFRRDHSKPNLPMPPSDHYKIVLPENKCGNLFNIQKMAPDIDSDKLKASE