| New model in OGS2.0 | DPOGS204997 |
|---|---|
| Genomic Position | scaffold1927:+ 52645-54115 |
| See gene structure | |
| CDS Length | 1128 |
| Paired RNAseq reads | 4389 |
| Single RNAseq reads | 14713 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010143 (9e-29) |
| Best Drosophila hit | crystallin (1e-21) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein RR-2 motif 70 [Bombyx mori] (2e-34) |
| Best NR hit (blastx) | cuticular protein RR-2 motif 70 [Bombyx mori] (3e-30) |
| GeneOntology terms | GO:0005212 structural constituent of eye lens GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | ND |
Nucleotide sequence:
ATGAAAAATTGGCGTGACCGCGATGTTTCACAGGCCGGTTGGGTTGCACAAGTAGCGTCT
TTGTTTACGTGGCATTGTCCAGCGTACCCATCAACCAGGCCCCACCCTTGTGTACACCAC
AGCAAAACAAGAAACAAAAACACAATGTTCAAGCTTGCAGTCTTCTCATGCTTGGTAGCA
TTGAGCTACGGCAGTGTTGCACCAGCAGCCATTGCAGCGGCACCTGTATACGCACCTGCA
GCAAGACTGGAAGAGTTCGATCCTCGACCACAATACAAATTCGGATACGAAGTAGCTGAC
AGTCTCACCGGTGACTACAAAACCCAAAACGAACAGCGTGATGGAGATGTTGTGCTAGGT
CAGTACTCTCTCGTGGAGCCTGATGGTACCCGTCGCATTGTTGACTACGCCGCCGACCCT
GTAAACGGATTCAACGCAGTAGTACGCAAAGAACCTCTTGTTGCCGCCGCGCCGGCAGTG
GTCGCTGAAGCCGAAGTAGTACCCGCTCGTCTCGCCGCTGCCCCTGCTGTGGCTGTCGCT
GAACCGGTAGTTGCTAAAGCAGTCGCCCCAGTCGTTGCCCAGCCTGCCCCAGCCGTCTTT
GCAGCTCGTTATGCTGTGGCTCCCGCTGCCAGATACGCCGTAGCACCTGCTCCCGTCTTC
GCTAAATACGCTGCAGCTCCTGTAGCAGCTGCACAATACGTTGCTGCCCCTGCTGCTAGA
TACGTTGCCGCCCCTGCAGCTCAATATGTTGCTGCCCCTGCTGCCCAATATGTTGCCGCC
CCTGCTGCCCAATATGTTGCCCCCGCTGCCCAATACGTTTCTGCCCCAGTCTCCCAATAC
GTTGCTGCCCCGGCGGCTCGTTATGTCGCCGCTCCAGCTGCTCAATACTTGGCTAGTCCA
GGAGTCTACAGTGCTCGATATGCCGCTGCTCCCTTTGTTTCCGCAAGATACGCTGCTCCC
GTAGTATCTTATGCCGCATCTCCAGCTAACCTTGCTGTGCCAGCTACATATGCCGCACCT
GTAGCTGCCGTCCCAGCTGCCCCCGCCCGTCTTGCTGCAGCCCCAGCTGCTGCTGCAGCT
CCAGCGAAAATCGTCCAAGGCGAAGCCGCTGGTTACCGTTATCCTTAA
Protein sequence:
MKNWRDRDVSQAGWVAQVASLFTWHCPAYPSTRPHPCVHHSKTRNKNTMFKLAVFSCLVA
LSYGSVAPAAIAAAPVYAPAARLEEFDPRPQYKFGYEVADSLTGDYKTQNEQRDGDVVLG
QYSLVEPDGTRRIVDYAADPVNGFNAVVRKEPLVAAAPAVVAEAEVVPARLAAAPAVAVA
EPVVAKAVAPVVAQPAPAVFAARYAVAPAARYAVAPAPVFAKYAAAPVAAAQYVAAPAAR
YVAAPAAQYVAAPAAQYVAAPAAQYVAPAAQYVSAPVSQYVAAPAARYVAAPAAQYLASP
GVYSARYAAAPFVSARYAAPVVSYAASPANLAVPATYAAPVAAVPAAPARLAAAPAAAAA
PAKIVQGEAAGYRYP