New model in OGS2.0 | DPOGS206453  |
---|---|
Genomic Position | scaffold599:- 42799-45585 |
See gene structure | |
CDS Length | 2787 |
Paired RNAseq reads   | 1007 |
Single RNAseq reads   | 2796 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005466 (0.0) |
Best Drosophila hit   | alpha-Adaptin, isoform A (0.0) |
Best Human hit | AP-2 complex subunit alpha-2 (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP009538-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | adaptor-related protein complex 2, alpha 2 subunit [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005886 plasma membrane GO:0005905 coated pit GO:0008565 protein transporter activity GO:0015031 protein transport GO:0048488 synaptic vesicle endocytosis |
InterPro families    | IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain IPR017104 Adaptor protein complex AP-2, alpha subunit IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal IPR003164 Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain IPR016024 Armadillo-type fold IPR009028 Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain IPR013041 Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain IPR011989 Armadillo-like helical IPR013038 Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain IPR015873 Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain |
Orthology group | MCL11661 |
Nucleotide sequence:
ATGCCTGCCGTCAGAGGAGATGGAATGCGAGGACTCGCAGTTTTTATATCAGATATACGG
AATTGTAAGAGTAAAGAAGCAGAAATAAAAAGAATTAATAAAGAACTGGCTAACATACGT
AGTAAATTTAAAGGTGACAAAACCTTAGATGGATATCAGAAGAAGAAGTATGTCTGCAAA
CTCCTGTTTATCTTTCTGTTGGGTCATGATATTGATTTCGGTCATATGGAAGCAGTGAAC
TTACTGTCCTCTAATAAATACTCAGAGAAGCAAATTGGATATCTTTTTATATCAGTTTTG
GTAAATACTAATAGTGATCTCATAAAACTTATCATACAGAGCATTAAAAATGACTTGCAG
TCTCGAAACCCTATTCACGTAAATCTTGCACTACAATGTATAGCTAATATTGGTAGTAAG
GATATGGCTGAGGCTTTTGGAACCGAGATTCCAAAATTACTAGTCTCTGGTGACACCATG
GATGTAGTCAAGCAGTCAGCAGCACTATGTCTTCTCAGATTGTTTCGTAAGTGTCCAGAA
ATTATTCCAGGAGGAGAATGGACTTCAAGAATCATACATTTGCTGAATGACCCACATATG
GGGGTAGTCACTGCTGCCACATCTCTTATAGATGCACTTGTTAAGAAAAATCCAGAAGAA
TATAAAGGATGTGTCACACTGGCTGTGGCCCGCCTTAGTAGGATTGTTACAGCAAGTTAC
ACTGATTTACAGGATTATACATATTATTTTGTGCCAGCCCCTTGGTTATCTGTTAAACTT
TTGCGCTTACTCCAGAACTACACCCCACCTTCAGAAGAGCCTGGAGTTCGTGGACGTTTA
TCTGAGTGCTTGGAAACCATATTTAATAAAGCTCAAGAGCCACCTAAGTCAAAGAAAGTG
CAACATTCGAATGCAAAGAATGCTGTTCTCTTTGAAGCAATAAGTCTTATAATTCACAAT
GATAGTGAACCTAATTTACTAGTTAGGGCATGCAATCAGCTTGGACAATTTTTAAGTAAC
AGAGAAACTAATTTGAGATACTTGGCACTTGAGTCAATGTGCCACCTTGCAACATCAGAA
TTTTCCCACGAAGCTGTTAAAAAACATCAGGAAGTTGTAATTTTATCTATGAAAATGGAA
AAGGATGTGTCTGTTAGACAGCAAGCTGTAGATTTACTATATGCCATGTGTGATAAAACA
AATGCTGAAGAAATTGTCCAAGAAATGTTGGCTTATCTTGAAACAGCTGATTATTCAATC
AGAGAAGAAATGGTCCTCAAAGTTGCCATATTATCTGAAAAATATGCTACTGACTTCACT
TGGTATGTTGATGTCATATTAAACCTTATAAGAATAGCTGGAGATTATGTTTCAGAGGAA
GTGTGGTATAGAGTTATTCAAATTGTCATAAACAGAGATGAAGTCCAAGGATATGCAGCA
AAAACTGTTTTTGAAGCCCTTCAAGCTCCAACTTGTCATGAAAATATGGTAAAAGTGGGT
GGATACATACTGGGTGAATTTGGAAACTTAATTGCTGGTGATACAAGATCTTCACCACAA
GTCCAATTTGAACTGCTACATTCAAAGTATCATCTTTGTTCTGCAGCTACAAGAGCACTG
TTATTGTCAACTTACATTAAACTGGTAAATCTCTTCCCTGAAATTAAAAACAGAGTGCAA
GAAGTTTTCCGTGCTGACTCAAATTTGCGATCTGCTGATGTAGAATTACAACAAAGGGCA
TCAGAATATCTGCAATTAAGTATAGTTGCCAGTTCAGACGTATTAGCAACAGTTTTGGAA
GAAATGCCTGCATTCCCAGAACGGGAATCATCAATTTTGGCTGTACTGAAAAAGAAGAAA
CCAGGTCGCATACCTGATGATGTAAAGGAGTCTAAGAGTCCTCAACCCAGTATCACACCA
GCTCCAGTTATTAATAATTCTATAAACAGCAATAATTCCAGTGCTGATCTTCTTGGTTTA
TCAACTCCTCCTGGTACTAATGCCACTACAGGAAATGGTTTATTAGATGTTCTTGGAGAC
TTATACTCTACACCCAAGAAAAGCCCAATCACTGTACAACAAAATAATATTAAGAAATTC
TTGTTTAAGAATAATGGAGTACTCTTTGAAAATGATCTCATACAAATTGGCGTTAAAAGT
GAATTCAGACAGAATTTGGGAAGAATCGGACTATTTTATGGTAATAAGACACAATCTGCT
ATTCAAAATGTCCATCCTGAACTACATTGGACTGATTTGCACAAACTGAATGTGCAGATG
AAACCTATGGAACCTGTTCTGGAAGCAGGTGCTCAAATTCAACAAATGCTAACAGCTGAG
TGCATTGAAGACTTTGCTGATGCACCAAGTATGTCAGTGTCATTCCTGTACAACAATGTT
CCACAGAAAATCTCAATGAAACTGCCCTTAACACTAAATAAATTCTTTGAACCAACTGAA
ATGAATGGAGAATCATTTTTCGCTAGGTGGAAGAATTTAGGTGGTGAACAACAAAGGGCG
CAAAAAATTTTCAAAGCTCAAGGCGCAATAGATATCCCAGCCACCCGAACTAAACTGGCT
GGTTTCGGTATGCAATTATTAGATGGTATTGATCCCAATCCTGACAACTTTGTGTGTGCA
GGAATTGTACATACAAGAGTTCAGCAGGTAGGATGCTTAATGAGATTGGAACCTAACAAA
CAAGCTCAAATGTTTAGACTTACTGTTAGATCAAGTAAAGAAACGGTCTCACAGGAAATA
TGTAATTTGCTAGCTGATCAATTCTAA
Protein sequence:
MPAVRGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKTLDGYQKKKYVCK
LLFIFLLGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQ
SRNPIHVNLALQCIANIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLLRLFRKCPE
IIPGGEWTSRIIHLLNDPHMGVVTAATSLIDALVKKNPEEYKGCVTLAVARLSRIVTASY
TDLQDYTYYFVPAPWLSVKLLRLLQNYTPPSEEPGVRGRLSECLETIFNKAQEPPKSKKV
QHSNAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATSE
FSHEAVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLETADYSI
REEMVLKVAILSEKYATDFTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINRDEVQGYAA
KTVFEALQAPTCHENMVKVGGYILGEFGNLIAGDTRSSPQVQFELLHSKYHLCSAATRAL
LLSTYIKLVNLFPEIKNRVQEVFRADSNLRSADVELQQRASEYLQLSIVASSDVLATVLE
EMPAFPERESSILAVLKKKKPGRIPDDVKESKSPQPSITPAPVINNSINSNNSSADLLGL
STPPGTNATTGNGLLDVLGDLYSTPKKSPITVQQNNIKKFLFKNNGVLFENDLIQIGVKS
EFRQNLGRIGLFYGNKTQSAIQNVHPELHWTDLHKLNVQMKPMEPVLEAGAQIQQMLTAE
CIEDFADAPSMSVSFLYNNVPQKISMKLPLTLNKFFEPTEMNGESFFARWKNLGGEQQRA
QKIFKAQGAIDIPATRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTRVQQVGCLMRLEPNK
QAQMFRLTVRSSKETVSQEICNLLADQF