New model in OGS2.0 | DPOGS206454  |
---|---|
Genomic Position | scaffold599:- 19396-36806 |
See gene structure | |
CDS Length | 4827 |
Paired RNAseq reads   | 9464 |
Single RNAseq reads   | 21511 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005468 (0.0) |
Best Drosophila hit   | CG8443 (0.0) |
Best Human hit | hypothetical protein LOC23277 (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to eukaryotic translation initiation factor 3 subunit (eif-3) [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | eukaryotic translation initiation factor 3 subunit, putative [Pediculus humanus corporis] (0.0) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR023231 GSKIP/TIF31 domain IPR011990 Tetratricopeptide-like helical |
Orthology group | MCL14289 |
Nucleotide sequence:
ATGGCTCTCGGCAGTGAAGTGAATGATGATAATGCTCCTAAACAGTCTTCACAGAAAGTG
AAAAAATGTCCTGTGACTAACAATCTTAGCGAAAAAAGTGGCGGTGATAATGTTAATAAA
GTTGTTAAAGCTGAGAAAGCGGGAAAGATGAAAAAGGATACAGATGTGAAAATAGTTAAT
TGTAGCAATGGACACGCCGGAACACCGAACGGCCGCTCGGATGACGAGGGCGGCGGCGGC
AGCGCCCTGCCACGTGTGTCGTACGCCGCGGCGGCACGCAAGGCATCGTCCCCACAGGCC
AACACTACGCCGCAACTACCGCCAAACGCAGAATGCCCCAAAGGAAAGACTAACAGCGAC
AAAACGTTACAAACTCAAACGACTAATAAATTAAATGGAGAGAAATCTCAATCGGATGAT
AGTGATAACTCCAATAAAGATAAATTAATTACCAAAGAACCAATATTAAACGGCACTCAG
AATTCCAACATAAAAGTTGTCAATGGTGACCCGAAGAATGTTTCCCATTGTGATATTAGT
AGTAGTAAAGTAGTTTCTAATGGTGTTAACAGTGATTCAGATGATACGAAGTCGAATAGA
TCGGACGAAAGTCAGGATGCGGTCATCCAACAAGATGTACCGGCTAAGGTCGCTTTACCA
AAAACTGGTAGCAAGAAAAAAGATAAGAAGCTGTCTGAGAAAAACAAGGCAGAGGATAAG
AAGGTTTCTGTAAAGGCAGAGGAAGCTGTAAAGAGCGTTGAGGAAGATAGCGATAAATCC
AAAGCTGATTCGAAAATGGTTAACGGTGAGAAAGAGAGAGAATCAACACCTAGTGAGGAT
GCCGACGAGAAGAAACGAGATGCCGAAGTTGTGTTCATACAAGACTTAGGATTCACTGTC
AAGATAGTCAGTCCCAAGGCTGAGCCATTAGATATACAGGTATCCAGCATGGAGCTTGTC
CAAGAGATACATCAGGTGCTCATGGATCGCGAAGACACTTGTCATAGAACCTGCTTCTCC
CTACAACTGGACGGTGTTACTTTAGATAATTTTGCGGAATTGAAGAACATCGAAGGCCTC
AAAGAAGGCTCAGTAATAAAGGTGGTTGAAGAGCCGTACACGATGCGCGAGGCTCGTATC
CACGTCCGTCATGTCCGTGATCTTCTCAAGTCCATAGACTACGTGGACGCATACGCCGGT
CAGGAGTGCAGCTCGCTAGCCTTCCTGAATGTCGTCACACAGGGGGATATTTTAGAGAAA
AAGAAATCTCGTCCAGAGAGCGTTGACTGCACCCCTCCAGACTACATCATGCCCGGTAGT
GTAGACCGACCTTTATTGCCTCTGCATCCCGGACTCACCAAAGAAAATAAAGCACCGCAA
TGTCTCAAGGTACTGACCACGTCTGGCTGGAACCCTCCCCCCGGTCCTCGTAAGATGTGC
GGTGACCTTCTCTATCTTCATGTCGTCACACTAGAAGATAGACATTTCCACATCACAGCC
TGCGCTCGAGGCTTTTATCTAAATCAATCCACCGAAGAAGTGTTCAACCCTCGTCCATTC
AACCCGTCCTTACTGTGTCATTCCTTAATCGAGCTTCTAAGTATTGTGTCTCCCGCTTTC
AAACGTAATTTCGCGTTGGTGCAAAAGAGACGGATGCAGAAACATCCCTTCGAAAGAGTC
GCCACACCATACCAAGTGTACCAGTGGGCCTCACCGATGCTTGATCACACAGTCGATGCT
ATCAGAGCCGAAGATACGTTCTCCTCCAAGCTGGGTTACGAGGAACACATCCCGGGCCAG
ACCCGCGACTGGAACGAGGAGCTTCAGACGACACGCGAGCTGCCGCGAGCCACACTACCT
GAGAGGCTGTTGAGGGAAAGGGCTATATTTAAGGTGCACAGTGATTTCGTTGCCGCTGCC
ACCCGCGGCGCCATGGCGGTGGTGGACGGTAACGTGATGGCTATAAACCCGGGCGAGGAG
CCCAAGATGCAGATGTTCATCTGGAACAACATCTTCTTCTCACTGGGCTTCGACGTTCGC
GATCACTACAAGGACCTCGGCGGGGACGCTGCAGCTTTTGTGGCGCCGCGTAACGACCTC
CAAGGCGTCCGCGTATACAGCGCTGTGGACACAGCGGGTCTGCATACACTGGGCACTGTG
GTGGTGGACTACCGCGGGTATCGCGTCACCGCCCAGTCCATCATACCCGGGATCCTGGAG
AAGGAGCAGGAACAGAGCGTCGTGTACGGCAGCATCGACTTCGGCACCACGGTCCTCTCG
CACCCGAAATATATGGAGCTGTTAAGCAAAGCTGGTCAACAGCTGAAGATAATGCCGCAC
TCAGTAATAAGTGCTAACGGCGAGACGGTGGAGTTGTGCTCGAGTGTTGAGTGCAAAGGT
ATTATCGGGAACGACGGCCGCCATTACATCCTCGATCTGTTACGCACTTTCCCGCCGGAT
GTCAACTTCCTGCAACTGGAAGACGATGAATTAAGGGAGGATATTAAATCTATGGGCTTC
CCAATCATACATAAGCACAAATTATGCTGCCTCAGACAAGAATTAGTCGACAGTTTCGTT
GAGGCGAGATACTTTATGTTCATACGTTACGCTGCATTCCACCTACAGCAGTTAAGTGCG
AAGCGTCAGTGTAAAAATGTAGAACAGAAATCTATAGAAGGCAAAGATAAAGATAGTGAT
AAGAAAGAGGCTGTTAAAGAGACTGAAAAAGCAACTAAGAGAGACAATAAAAGTCAGGAA
AAGGAAGTCAAAGAAAAGAAAAAGAAAGAAGAGAAAAAAGATAAACAAGAAAAGCTAGAT
GCCAAAAAGGATGACGTCGGTGTTGAAGATACCGAAAATATTGATGTGAATATAAAAGAA
AAAGTAGATGAACTCCTGCTGAGTGAAAACTACTCCGACATCGATACAGACGTCGCCAAA
AAGATCGTGGAGAGCATCACAGACTCGATTTGTAGCGGAGGGAAACAAGAAACAGATTCA
GGTGAAGGTTCGAGAGCCGTGGTGTCGTCGGCGGCGCGGGCGGTGGCGTCTCTTAAGGAG
TCGGAGTTCGACGTCCGGTTCAATCCCGACGTGTACTCGGCGGGCATCAAACACGCGGCC
GCCCCGGAGCAGCTGGCGAAACAGAGACACCTCGTAAAGGAAGCGGCGGCCTTCCTACTC
ACGACACAGATACCCGCCTTTGTCCGTGAATGTCTGGAGCACACGTCGGCGCCCATGGAC
GGCGCGGGGCTGACTGAAGCGCTTCACGCCCGCGGCATCAACGTCCGCTACCTGGGCCGC
GTCACCGTCGCCCTCAAGCCGCACGCTTCGCTCTCATACTTACACGCGATCGCTCTGGCA
GACCTGCTGCTGAGAGCCGCCAAACATATATACACGCCCTACTTGCAGGGCTGTGAAGCG
ATGTGTACGAGTGCAGCGGTGGCACACTTCCTGAACTGTCTGCTGGGGGCGTGTCCCAAT
CCCGTGGCCAGCATGTGCGAGGCCCCGGCCAAGGTGACTCGCTCTAGAGGAAGGAGGTCT
AAGAAGAATCACACTTCCTCCCCACCACCCACACCGGACTGGCAAAACCTCACGCCTAGA
ACACTATTCACACAGATTAAACAGGAACTTAAGTCCTACTGGGGCTACGAGTTAAACGCT
GAAAACATGGATGTTGTCATTGAAAAGAATGGTCTTCAAAAAATTTCTCTGCTCAGATCT
TTTGCACTGAAAGTTGGTCTGCAAATGTTACTACGGGAATACGACATCGACAATAAGAAC
AAGACCACATTCTCCAGTTCCGATATAATGAACATTTTCCCAGTCGTTAAACATATTAAT
CCAAGGGCCTCAGATGCTTACAACTTCTATACAACTGGACAAAATAAAATTCAATCAGGA
GCCGTGTCCGAGGGTCACGAACTGATAGCCGAAGCTCTAAATCTCCTCAACAACGTGTAT
GGTGCTATGCATGGGGAAATAGCGCAGTGTCTCCGCATGGTCGCTAGATTGTGCTACGTG
ACCGGCGAACATAGAGACGCCATGGCGTACCAACAAAAAGCTGTTCTGATGTCTGAAAGA
GTGAATGGCATCGACCATCCGTACACCATAACGGAATACTCTCACCTAGCCTTGTACTGC
TTCGCGAACGGTCAAGTGAGCACTGCTCTGAAACTGTTGTATCGCGCTCGATACCTCGCC
TTGTTGGTGTGCGGAGAGAATCACCCAGAGATGGCGCTACTGGACAGCAACATAGCGTTA
ATACTGCACGCGGTGGGCGAGTACGAGCTGTCGCTGCGGTTCGCGGAGCGCGGTCTGCGG
GTGACGGCCGCCACACACGGCGCGCGCTCGCTCAAGGCGGCGGTCGCTCGGCACCTGCTG
GCGCGCACGCTCTCCTGCCTCGGGGACTTCAGAGCGGCCCTGCAGCACGAGAAGGAGACC
TACTCTATATATAAGCAACTGCTGGGAGAAAAGCACGAGAAGACCCGCGAGTCATCAGAG
TGTCTCCGTCACCTGACGCAGCAGGCGGTCGTGGTACAGAAGCGACTGGCGGAGGCCTTC
GCCCGCGGACACCACGCGCACCCCGCGCCCCTCCACATACAACCGCCCGCGATGTCCTCC
GTCATAGACATGCTCAACCTCATCAATGGAATACTTTTCGTACAGATAAGTCCGCAAGAC
ATCGAGCAGTTCAAGGCCGAAATAGAGAAAAGACAACTGAAGGATTTGCCCATCCCCGGC
CTCGGCGAGGCGAGCGTTAAGGATTCAAAGGAGGCAGAGGCGGGCGCCGCGGGGGGAGTG
GGGGAAGCCGGGGGAGGGGAGAGTTGA
Protein sequence:
MALGSEVNDDNAPKQSSQKVKKCPVTNNLSEKSGGDNVNKVVKAEKAGKMKKDTDVKIVN
CSNGHAGTPNGRSDDEGGGGSALPRVSYAAAARKASSPQANTTPQLPPNAECPKGKTNSD
KTLQTQTTNKLNGEKSQSDDSDNSNKDKLITKEPILNGTQNSNIKVVNGDPKNVSHCDIS
SSKVVSNGVNSDSDDTKSNRSDESQDAVIQQDVPAKVALPKTGSKKKDKKLSEKNKAEDK
KVSVKAEEAVKSVEEDSDKSKADSKMVNGEKERESTPSEDADEKKRDAEVVFIQDLGFTV
KIVSPKAEPLDIQVSSMELVQEIHQVLMDREDTCHRTCFSLQLDGVTLDNFAELKNIEGL
KEGSVIKVVEEPYTMREARIHVRHVRDLLKSIDYVDAYAGQECSSLAFLNVVTQGDILEK
KKSRPESVDCTPPDYIMPGSVDRPLLPLHPGLTKENKAPQCLKVLTTSGWNPPPGPRKMC
GDLLYLHVVTLEDRHFHITACARGFYLNQSTEEVFNPRPFNPSLLCHSLIELLSIVSPAF
KRNFALVQKRRMQKHPFERVATPYQVYQWASPMLDHTVDAIRAEDTFSSKLGYEEHIPGQ
TRDWNEELQTTRELPRATLPERLLRERAIFKVHSDFVAAATRGAMAVVDGNVMAINPGEE
PKMQMFIWNNIFFSLGFDVRDHYKDLGGDAAAFVAPRNDLQGVRVYSAVDTAGLHTLGTV
VVDYRGYRVTAQSIIPGILEKEQEQSVVYGSIDFGTTVLSHPKYMELLSKAGQQLKIMPH
SVISANGETVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLQLEDDELREDIKSMGF
PIIHKHKLCCLRQELVDSFVEARYFMFIRYAAFHLQQLSAKRQCKNVEQKSIEGKDKDSD
KKEAVKETEKATKRDNKSQEKEVKEKKKKEEKKDKQEKLDAKKDDVGVEDTENIDVNIKE
KVDELLLSENYSDIDTDVAKKIVESITDSICSGGKQETDSGEGSRAVVSSAARAVASLKE
SEFDVRFNPDVYSAGIKHAAAPEQLAKQRHLVKEAAAFLLTTQIPAFVRECLEHTSAPMD
GAGLTEALHARGINVRYLGRVTVALKPHASLSYLHAIALADLLLRAAKHIYTPYLQGCEA
MCTSAAVAHFLNCLLGACPNPVASMCEAPAKVTRSRGRRSKKNHTSSPPPTPDWQNLTPR
TLFTQIKQELKSYWGYELNAENMDVVIEKNGLQKISLLRSFALKVGLQMLLREYDIDNKN
KTTFSSSDIMNIFPVVKHINPRASDAYNFYTTGQNKIQSGAVSEGHELIAEALNLLNNVY
GAMHGEIAQCLRMVARLCYVTGEHRDAMAYQQKAVLMSERVNGIDHPYTITEYSHLALYC
FANGQVSTALKLLYRARYLALLVCGENHPEMALLDSNIALILHAVGEYELSLRFAERGLR
VTAATHGARSLKAAVARHLLARTLSCLGDFRAALQHEKETYSIYKQLLGEKHEKTRESSE
CLRHLTQQAVVVQKRLAEAFARGHHAHPAPLHIQPPAMSSVIDMLNLINGILFVQISPQD
IEQFKAEIEKRQLKDLPIPGLGEASVKDSKEAEAGAAGGVGEAGGGES