| New model in OGS2.0 | DPOGS202193 |
|---|---|
| Genomic Position | scaffold248:- 33550-34920 |
| See gene structure | |
| CDS Length | 1026 |
| Paired RNAseq reads | 569 |
| Single RNAseq reads | 1403 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013491 (7e-148) |
| Best Drosophila hit | CG7671 (2e-48) |
| Best Human hit | nucleoporin Nup43 (7e-46) |
| Best NR hit (blastp) | PREDICTED: similar to nucleoporin Nup43 [Tribolium castaneum] (8e-84) |
| Best NR hit (blastx) | PREDICTED: similar to nucleoporin Nup43 [Tribolium castaneum] (1e-84) |
| GeneOntology terms | GO:0000776 kinetochore GO:0007049 cell cycle GO:0005515 protein binding GO:0051028 mRNA transport GO:0051301 cell division GO:0007059 chromosome segregation GO:0005635 nuclear envelope GO:0000777 condensed chromosome kinetochore GO:0031080 Nup107-160 complex GO:0005694 chromosome GO:0015031 protein transport GO:0005634 nucleus GO:0055085 transmembrane transport GO:0007067 mitosis |
| InterPro families | IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL13030 |
Nucleotide sequence:
ATGCCTATAGATGTCCAAGGTACTTTTGTATCTCAGAAAATAAATAAAGTGCGATGGATT
CCCGAAGATTACATGGAAACGAAACATTTTTTCACTGGAAGTTGGGACGACGATGAAAAT
TCTATAAAAGTTTGGAGCTTTGAGACTGCCAATGAAGATGAAGATGTAGAGTATCCCCGG
CAGTTATCGGAATATAAAGTTGATGGTGATGTGACTGAAATTAAGTTCACAAACAAAAAT
GTGATAGCAGTTTCTATATCCAATGGTGATGTGAAAATGCTCGAGATTAGTGCTTATGAT
AAAGAATCTCCTTTGAAAGAAGTTTATACTTGGAACAACTTGCACAATTACGGATTGGAA
AAATGTTCCTGTACATCCTTGGATACCTTAGAAGGAGATATAGCTAGTATAGGAGAGGAT
GGTAATGTTAACATATTAAATGGAAGACGAGGGGACATTTCACAAACTATTAAAGGAGCT
GATAGCTGCTCTCTACACTCCGTCTGCTTTATAAAATTAAATGAGGTCATAACGGGAAAC
ATCAGGGGCCACATGAAGATCTGGGACATAAGATCATCAACCAACAAACCGTCGGCAGCA
TTCCTACTAGCGGGTGATGAGTTAGCTGCAACCTGTATCATCCATCACCCAACACAACCC
CATATTGTCTTAGCTGGTAGCGAGTCTGGAGCATTAGCTTTGTGGGATTTGAGAATGAAT
CAGTTCCCTACATCTCTGCTTAATGCACACGGGGGTGGCGTCACAGAAATGCAATTCCAC
CCAGAAAATCCTAATAAACTGCTAACTACTTCAGTTTCTGGTGAAATTTGGGAGTGGAAT
ATGGACATGTTGACAAAGAAAATGTCCGATGATTACATGCCGGTGGACGATAAAACAAAC
ATGAATGTAAACTCCTTGATGCCGACACTACATAAAGCCATCAATACATTGCATTGCGAC
CGAGGAAGAACTTTGTGTGGTGCAGATAACGAAGCTATATATTTAATAAAGAATCTGAGA
TATTAG
Protein sequence:
MPIDVQGTFVSQKINKVRWIPEDYMETKHFFTGSWDDDENSIKVWSFETANEDEDVEYPR
QLSEYKVDGDVTEIKFTNKNVIAVSISNGDVKMLEISAYDKESPLKEVYTWNNLHNYGLE
KCSCTSLDTLEGDIASIGEDGNVNILNGRRGDISQTIKGADSCSLHSVCFIKLNEVITGN
IRGHMKIWDIRSSTNKPSAAFLLAGDELAATCIIHHPTQPHIVLAGSESGALALWDLRMN
QFPTSLLNAHGGGVTEMQFHPENPNKLLTTSVSGEIWEWNMDMLTKKMSDDYMPVDDKTN
MNVNSLMPTLHKAINTLHCDRGRTLCGADNEAIYLIKNLRY