| New model in OGS2.0 | DPOGS202226 |
|---|---|
| Genomic Position | scaffold248:+ 76659-79313 |
| See gene structure | |
| CDS Length | 630 |
| Paired RNAseq reads | 17 |
| Single RNAseq reads | 35 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013526 (4e-31) |
| Best Drosophila hit | CG17331 (1e-39) |
| Best Human hit | proteasome subunit beta type-2 isoform 1 (4e-34) |
| Best NR hit (blastp) | proteasome beta 2 subunit-like protein [Xenopsylla cheopis] (3e-55) |
| Best NR hit (blastx) | proteasome beta 2 subunit-like protein [Xenopsylla cheopis] (4e-50) |
| GeneOntology terms | GO:0005839 proteasome core complex GO:0004175 endopeptidase activity GO:0051603 proteolysis involved in cellular protein catabolic process GO:0004298 threonine-type endopeptidase activity GO:0009987 cellular process GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR016050 Proteasome, beta-type subunit, conserved site IPR001353 Proteasome, subunit alpha/beta IPR023333 Proteasome B-type subunit |
| Orthology group | MCL12015 |
Nucleotide sequence:
ATGAGTAACACTAGTCTGTTGTTCCAGTGTCTGCTTGGAATAAGATGTAACGATTTCACG
ATGATCGCCGCGGATCAGACGAACACGCAGGGCGTTCTGGTTATGAGAGATGATGACGAC
CGTTTGTTGGAGATTGCGGACAAGATAGTGTTGGGTGTGAACGGCACAACTGGAGACATC
GTTCAGTTCACACAGTTCGTAGCCAAGAATTTGAGGTTATACGAAATGAGGAACAAGTAC
GGTCTGGACTCGCGGGCGGTTATACACTTCACGAGGAAGATAATGGCGGACGGATTAAGG
GATGGCAATCCATGTTTACTGAACGTCCTGATGGCTGGTTATGATGATGAGGCCGGGAGC
CAGCTCTACTCGATGGATTTCCTTGCGTCGTATGTCAGCGCGCCGTTTGCTGTTCATGGT
CTTGGCGGCTTTCTGTCTTTGAGTATCCTCGACAATTACTACAAGCCAACCTTAACTGAA
ATAGAGGCGTACGAAGTGATCAAGCTGTGCGTCTCCGAGATCCAAAATCGACTTTTTCTT
AATCTGTCAAACTTCGGGGTGAAATCCGTCACCAAGTGGGGTGTTAAAACACTTCCCACA
ATCAACCCAACAACATTTTCATCGAAATAA
Protein sequence:
MSNTSLLFQCLLGIRCNDFTMIAADQTNTQGVLVMRDDDDRLLEIADKIVLGVNGTTGDI
VQFTQFVAKNLRLYEMRNKYGLDSRAVIHFTRKIMADGLRDGNPCLLNVLMAGYDDEAGS
QLYSMDFLASYVSAPFAVHGLGGFLSLSILDNYYKPTLTEIEAYEVIKLCVSEIQNRLFL
NLSNFGVKSVTKWGVKTLPTINPTTFSSK