New model in OGS2.0 | DPOGS211437  |
---|---|
Genomic Position | scaffold6213:- 3555-5262 |
See gene structure | |
CDS Length | 588 |
Paired RNAseq reads   | 2590 |
Single RNAseq reads   | 12676 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002186 (2e-101) |
Best Drosophila hit   | thioredoxin peroxidase 1, isoform A (8e-83) |
Best Human hit | peroxiredoxin-1 (3e-78) |
Best NR hit (blastp)   | thiol peroxiredoxin [Bombyx mori] (5e-105) |
Best NR hit (blastx)   | thiol peroxiredoxin [Bombyx mori] (1e-103) |
GeneOntology terms    | GO:0008379 thioredoxin peroxidase activity GO:0016209 antioxidant activity GO:0004601 peroxidase activity GO:0005829 cytosol GO:0042744 hydrogen peroxide catabolic process GO:0045454 cell redox homeostasis GO:0004602 glutathione peroxidase activity GO:0005875 microtubule associated complex GO:0006974 response to DNA damage stimulus |
InterPro families    | IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR019479 Peroxiredoxin, C-terminal IPR012336 Thioredoxin-like fold IPR017936 Thioredoxin-like IPR012335 Thioredoxin fold |
Orthology group | MCL11344 |
Nucleotide sequence:
ATGCCTCTCCAGCTGACCAAACAAGCTCCTCAGTGGAAGACCACGGCCGTCGTCAACGGC
GAGTTCAAGGACATCGCTCTGTCCGACTACAAGGGGAAATACGTTGTGCTGTTCTTCTAC
CCCCTGGACTTCACGTTCGTGTGCCCTACCGAGATCATCGCTTTCTCGGAGCGCGCGGAC
GAGTTCCGCAAGTTGGGATGTGAGGTGATCGCCGCCTCCACGGACTCGCACTTCACTCAC
CTGGCGTGGATCAACACGCCCAGGAAGCAGGGCGGTCTGGGACCCATGAACATCCCCATC
ATCAGCGACAAGTCGCACCGCATCGCCCGGGACTACGGCGTGCTCAACGAGGAGTCCGGG
ATACCCTTCAGGGGACTCTTCATCATCGACGACAAACAGAACCTCAGACAGGTCACCGTC
AACGACCTGCCCGTGGGGAGGTCAGTAGACGAAACCCTTCGCCTGGTGCAGGCGTTCCAG
TTCACTGACAAGCACGGCGAAGTGTGTCCGGCCAACTGGAGGCCGGGTGCCAAGACCATC
AAACCTGACAGCAAGGCTGCCCAGGAGTACTTCGGAGACGTCAACTAA
Protein sequence:
MPLQLTKQAPQWKTTAVVNGEFKDIALSDYKGKYVVLFFYPLDFTFVCPTEIIAFSERAD
EFRKLGCEVIAASTDSHFTHLAWINTPRKQGGLGPMNIPIISDKSHRIARDYGVLNEESG
IPFRGLFIIDDKQNLRQVTVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPANWRPGAKTI
KPDSKAAQEYFGDVN