New model in OGS2.0 | DPOGS205225  |
---|---|
Genomic Position | scaffold2543:+ 3361-7948 |
See gene structure | |
CDS Length | 1296 |
Paired RNAseq reads   | 130 |
Single RNAseq reads   | 353 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003826 (2e-104) |
Best Drosophila hit   | isopeptidase-T-3, isoform A (2e-15) |
Best Human hit | ubiquitin-associated domain-containing protein 1 (1e-12) |
Best NR hit (blastp)   | ubx domain-containing protein, putative [Pediculus humanus corporis] (6e-27) |
Best NR hit (blastx)   | ubx domain-containing protein, putative [Pediculus humanus corporis] (2e-24) |
GeneOntology terms   | GO:0004221 ubiquitin thiolesterase activity |
InterPro families    | IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type IPR015891 Cyclophilin-like IPR009060 UBA-like IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote |
Orthology group | MCL15384 |
Nucleotide sequence:
ATGTATGAGGAGTTATTGTTGATTGAAAGGAGAATTCCCGAGGCAGGGACCCTTTGGGAT
CTCGGAGCGGTCAGAGCGCCACAGCACGGAGCTATCACGACAGCGACCGCAGCGCTCCCA
GCACCCCAGAACCCAGTCCGTCAGCCGAATTTACAATCTCTGCTATCCACCAACGAACTG
TCATTTGAGTTGAGGAAGATACTTATATCCCTCATCGAAGCCGGAGCCAGATTAGCAGCA
GCGGGGAGAAACTACGAACTCACGTTGGCTCAGCTAACCGCCGCTTTGGAAGAGCCGAGG
AAACCTCAACCGATTATCGTCCAAGTGATAACTCCAGAAGAAATAGCAGCGCGACTGAAT
AGCGCTGACGTGAACAGTATATCAACGGGCACTTCGAACGGCGGTGATGAGTTATACAAA
CGAGCACAGCATTTACAGCGATTCCTAGAAAAATTTCGAGCTTGGAGAATAAAAATAATG
GACCCTCCAAACCCCGAGGCGATTACTGCTTTAAAAGATCTTGGATTTTCTTACGACGAT
GCGGATAATGCCTTGAGAACCACCGGATGTAATGTACCAGCTGCCGCGTCATGGCTTATG
GGGGAGAGAGGTTCCAGCGTGTTCGAACTGATCAACGGTCTACCGGATGGCCTCATCCTG
CAGACGCTCCTTAAGCAGCCCCAGATCCAGCGTGGGCTATTGAACACGAGAATGTTGATC
GCCTTTATAGCGATGGTTGGGCAGACCGGCAGCGCGTCTCTCTGGTTGAATTCTCCCCAC
GGCAGTCCCTTACTATCACAAATATCCAGGACCTACCACTCAGAGAAGTACTGCCTCGCG
GTCAACCAGTTCTCTGAGAGACAGGAACAGCAAACTGCACCGAAAGTCCCCCACTTGTTT
TGGTCCGGTGGAGATGTAATCTACGACGCCGGCGTCGGGTGCTACGCCCAGCGTGGACGC
AGCAGACCTATCGGCGCCGAGAACTACCACTTTCCACATTCCATGCCAGGATTGCTGTCA
ATGCGAATGACCGGTGACGATGAGATGTGCGGTATCTTCAACATAACCTTCAAAGCCTTG
CCCCAGTTCGATTTACGGAATGTCGTCTTCGGTAGAGTAATCCGACCGTGCCCCACATTC
GACGTGATCCAAACCCTCCCGGCGAATCCCCACCCAGCCATCGAAATAGCCTCAGCCCGG
TTCAGGCTCGAGTCCGGCTGGGTGTGTGGCGCCCGGAACGCCAGGATTCGACCCACCCAC
CCCACCCACGTCCCCAGACCGAGACGCCAACAATAA
Protein sequence:
MYEELLLIERRIPEAGTLWDLGAVRAPQHGAITTATAALPAPQNPVRQPNLQSLLSTNEL
SFELRKILISLIEAGARLAAAGRNYELTLAQLTAALEEPRKPQPIIVQVITPEEIAARLN
SADVNSISTGTSNGGDELYKRAQHLQRFLEKFRAWRIKIMDPPNPEAITALKDLGFSYDD
ADNALRTTGCNVPAAASWLMGERGSSVFELINGLPDGLILQTLLKQPQIQRGLLNTRMLI
AFIAMVGQTGSASLWLNSPHGSPLLSQISRTYHSEKYCLAVNQFSERQEQQTAPKVPHLF
WSGGDVIYDAGVGCYAQRGRSRPIGAENYHFPHSMPGLLSMRMTGDDEMCGIFNITFKAL
PQFDLRNVVFGRVIRPCPTFDVIQTLPANPHPAIEIASARFRLESGWVCGARNARIRPTH
PTHVPRPRRQQ