New model in OGS2.0 | DPOGS204084  |
---|---|
Genomic Position | scaffold1457:- 13673-17956 |
See gene structure | |
CDS Length | 1227 |
Paired RNAseq reads   | 1557 |
Single RNAseq reads   | 4322 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011237 (3e-122) |
Best Drosophila hit   | Rpn9, isoform A (2e-65) |
Best Human hit | 26S proteasome non-ATPase regulatory subunit 13 isoform 1 (6e-57) |
Best NR hit (blastp)   | 26S proteasome non-ATPase regulatory subunit 13 [Bombyx mori] (4e-146) |
Best NR hit (blastx)   | 26S proteasome non-ATPase regulatory subunit 13 [Bombyx mori] (6e-129) |
GeneOntology terms    | GO:0008541 proteasome regulatory particle, lid subcomplex GO:0006508 proteolysis GO:0005838 proteasome regulatory particle GO:0004175 endopeptidase activity GO:0007096 regulation of exit from mitosis |
InterPro families   | IPR000717 Proteasome component (PCI) domain |
Orthology group | MCL13672 |
Nucleotide sequence:
ATGGCCTCCGTAAAGTTTGCTGTTGTTGATGCGAACGATTATTTATCAAAAAAACAGGCT
TCGGATCCTGAATTAGCCTCAGATTGGGCCAAGCTAGAAGAACTATATAATAAGAAATTA
TGGCACCAACTTACATTAAAACTTCAAGAATTCGTAAAGCACCCCTCATTGCAGAGCGGC
GACAACTTGATCCAGCTTTACAACAACTTCCTAACGATCTTTGAGAATAAAATCAATCCA
CTGTCCCTGGTAGAGATAGTCGCACACATTGTAACTCAGTACGCAGACAAGAGAGAAGCC
GTGGCATTCCTGGAAAAAATTGAAGCTAAGGTCAAAATGAATGCCGAGGCGCTCGCTCTG
TGTAAGGTCCTGCAAGGCCAAATCTATCTGGAGCATCTGAACGACCTTGATGCTACGGAG
AAAATCATAGACGTCCTCGAGAATACCTTGGAAGATGCCGACGGAGTCACACCGGTACAT
GGAAGGTTTTATAAACTGGCTTCGGAATATTACAGAGTTCGTGGACCCATGGCCCGTTAC
TACGTGGCGGCGCTCCGTTACGTGGGCTGTGCGGGTGGAGGGGCGAACCTCCCATTGCAC
GAGCGTCGTACCTTGGAAGATGCCGACGGAGTGACACCGGTACATGGGAGAGTTCGTGGC
CCCATGGCCCGTTACTACGTGGCGGCGCTCCGTTACGTGGGTTGTGCGGGTGGAGGGGCT
AACCTCCCATTGCACGAGCGTCGCGCCGCAGCCCTACGACTGGCGCTGGCAGCCGTACTT
GCACCCACCGTCTACGATCTGGGAGAGCTGGCAGTGGCAGCAGGAGATGTGGTCGCCTTT
GAGAAGATACGAGCACAATCTCCTCACCAAGAACTTCATCGGGCAGATCGGCAGTTGAGA
CAGAAGATTGCCATATTGTGTCTCATGGAGATGGCGTTCAACCGTTCATCCACCCAGAGG
AAGCTGACCTTCGCTGAGATAGCTCGGGCTGCACGAGTCCCAGCATCGGATGTGGAGCTG
CTCGTGATGAAGGCTCTCGCTGAAAAACTGGTCCGGGGACACATTGACCAGGTGAACGAG
ACAGTTAGTATCACGTGGGTGAGGGCTAGAGCCCTAGGTAGAGCTGGTGCCGGTCGTCTT
GCCGCTCGTCTAGACGCTTGGTGCTCCGCGGCCGCAGCAGCAGAAGGACTCCTTCAAAGA
ACCGCCCCGGATTTACTCACTCTGTAA
Protein sequence:
MASVKFAVVDANDYLSKKQASDPELASDWAKLEELYNKKLWHQLTLKLQEFVKHPSLQSG
DNLIQLYNNFLTIFENKINPLSLVEIVAHIVTQYADKREAVAFLEKIEAKVKMNAEALAL
CKVLQGQIYLEHLNDLDATEKIIDVLENTLEDADGVTPVHGRFYKLASEYYRVRGPMARY
YVAALRYVGCAGGGANLPLHERRTLEDADGVTPVHGRVRGPMARYYVAALRYVGCAGGGA
NLPLHERRAAALRLALAAVLAPTVYDLGELAVAAGDVVAFEKIRAQSPHQELHRADRQLR
QKIAILCLMEMAFNRSSTQRKLTFAEIARAARVPASDVELLVMKALAEKLVRGHIDQVNE
TVSITWVRARALGRAGAGRLAARLDAWCSAAAAAEGLLQRTAPDLLTL