| New model in OGS2.0 | DPOGS215942 |
|---|---|
| Genomic Position | scaffold720:+ 5957-10386 |
| See gene structure | |
| CDS Length | 1341 |
| Paired RNAseq reads | 404 |
| Single RNAseq reads | 1116 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001951 (4e-172) |
| Best Drosophila hit | modifier of rpr and grim, ubiquitously expressed (6e-61) |
| Best Human hit | ubiquitin-conjugating enzyme E2 D3 isoform 2 (2e-26) |
| Best NR hit (blastp) | ubiquitin-conjugating enzyme morgue, putative [Pediculus humanus corporis] (6e-106) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin-conjugating enzyme morgue [Nasonia vitripennis] (2e-88) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0006915 apoptosis GO:0046675 induction of compound eye retinal cell programmed cell death GO:0006917 induction of apoptosis GO:0046668 regulation of retinal cell programmed cell death GO:0019005 SCF ubiquitin ligase complex GO:0016567 protein ubiquitination GO:0019787 small conjugating protein ligase activity GO:0043687 post-translational protein modification GO:0051246 regulation of protein metabolic process |
| InterPro families | IPR000608 Ubiquitin-conjugating enzyme, E2 IPR001810 F-box domain, cyclin-like IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR022364 F-box domain, Skp2-like |
| Orthology group | MCL16201 |
Nucleotide sequence:
ATGTCTGTAATAGCCCCAGAGTTTCTTAATTTTATTAAAAGGTTAGAAGATAACGGTGAC
AAATTGGTTCCTGCGTCTCCGACAGAACAACCTTTGGAGTTTGAATTTAATAACTCCAGC
TGTTATGTATGCAATGGATATTATGGGCCGAGTTTTGGAGAACCAGTTTGCATAACTTGT
CATGCGTTTTTGTTTCCCGACTTCCCTTCACATTTGCCAAGTTCATACTTTTGCAGTGAA
AAAACTGATGATGGAGACTCAGGGAATGACGAGCCCTCAGATTTGAACTATAGTTCCGAA
CGTAGAGTGAACAAAGCTTGCCCATTACCAGCATGGTGGTATTACAGAAACTCATTAGAC
AGTGAAACGAGTCCAGAGGATGAGAGTCGAGCTAGTAATTCAGGGCCCGGAGCTAGTGGC
AGTGGCAGCGGAGGCAGTGGCTCTGGCCCATCATCTGCTCACCGAGAAGGTATTGAGGAC
TTGGTTGGTCATGGTCCTCCACCACAGCCACCCAGCCTAGCGCTGTCACTGCAGGCTCTA
TCAACACCTCGGCCACCAGATAACTTGGCTCCTGGTTTGGTAGAGCATCTACCAGCTGAA
GTGTTGCTATGCATCTTCCGTTACCTGGACGACCTCTCCTTGTGTGCGTGCTCGTGTGTG
TGTGTGAGGTGGCGCCGCCTGGTGGTGGCTAGAGTGCCGCCGCCTCGCTGGGCAGCCTTC
GCAGCCACTCGCTGGCCGCTCTTCAGGCCACTGTTGGCCAACATTGATTGGCACAAGAAG
TACCAATCATTGGTGGAGTCCTGCTTCTGCCGTAACTGTCTCGTCCAGATGTTCGTCCAG
GCTCAGCCCGCTGGTGATGAGAGTGCTTGGAGGAGAAACAGGCTTAAGATCGAGCTTAAG
ATGCTCCGTAATGATCCCCCAGAGGGCATCGCTGCTACTCCGCTAGACCCCAAGTGTTGC
CACTGGCAGGCCAGTGTGACTGGACCTGTGGGGTCACCATACGAGGGAGGAGTCTTCTAT
CTTTACATACAAGTCCCTTACTCCTACCCCATGGGTCCGCCTGTGGTTCGGTTCCTGACT
CGTATCTTACATCCCAATGTGTCTCGTCATGGGGATGTTGGTATCGACTCGGTTCATCAC
AACTGGTCACTGGCCCTCACTCTCTCTAAAGTCCTCATCTCCATACAGAGTCTGCTGACG
GATCCTTATACTGCGGTGTGCATGGAACCGGCATTGGGTGACATGTACGTTAGAGAACGC
AGCCGCTTTGAAGCGCTCGCTCGTCGCTGGACGTGGCGATACGCTATGCACGACGTACTA
CCGCATCTTACGCGATATTAA
Protein sequence:
MSVIAPEFLNFIKRLEDNGDKLVPASPTEQPLEFEFNNSSCYVCNGYYGPSFGEPVCITC
HAFLFPDFPSHLPSSYFCSEKTDDGDSGNDEPSDLNYSSERRVNKACPLPAWWYYRNSLD
SETSPEDESRASNSGPGASGSGSGGSGSGPSSAHREGIEDLVGHGPPPQPPSLALSLQAL
STPRPPDNLAPGLVEHLPAEVLLCIFRYLDDLSLCACSCVCVRWRRLVVARVPPPRWAAF
AATRWPLFRPLLANIDWHKKYQSLVESCFCRNCLVQMFVQAQPAGDESAWRRNRLKIELK
MLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQVPYSYPMGPPVVRFLT
RILHPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPALGDMYVRER
SRFEALARRWTWRYAMHDVLPHLTRY