New model in OGS2.0 | DPOGS215945  |
---|---|
Genomic Position | scaffold720:+ 40373-42516 |
See gene structure | |
CDS Length | 621 |
Paired RNAseq reads   | 23 |
Single RNAseq reads   | 419 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001953 (2e-07) |
Best Drosophila hit   | bancal, isoform A (9e-07) |
Best Human hit | heterogeneous nuclear ribonucleoprotein K isoform b (2e-07) |
Best NR hit (blastp)   | PREDICTED: similar to bancal CG13425-PC, isoform C [Apis mellifera] (4e-12) |
Best NR hit (blastx)   | PREDICTED: similar to bancal CG13425-PC, isoform C [Apis mellifera] (7e-12) |
GeneOntology terms    | GO:0003677 DNA binding GO:0005681 spliceosomal complex GO:0008380 RNA splicing GO:0005654 nucleoplasm GO:0006397 mRNA processing GO:0005737 cytoplasm GO:0005634 nucleus GO:0003723 RNA binding |
InterPro families    | IPR018111 K Homology, type 1, subgroup IPR004088 K Homology, type 1 |
Orthology group | MCL21876 |
Nucleotide sequence:
ATGAAACGCGACGCGTACGGTGACGATGGTCCCATGCAGAAAAGACAGCGACACAGCGAC
GATGAGGTCACCTTCCTCATACCGAGCAAGGTCGCTGGGTCAATTATTGGGAAAGGAGGC
GCTAACATATCCAAGCTGAGGAATGAGCCAGTTACAGGTTCTTACTGCCCCCGAGAAGTG
TCTGTGAACGTAGCGGGTCGCACCGCGCGCCTCCATACCAACCGACCTACCATTATCAAC
TGCACCCTTAACCTAACTTTACCCGGTCACTCAACAGTCAGCCGCTTCATCCCCGATCCC
ATGACGTCACGTCCGTCCACCCCATCACCACCACCGCCACTCCCCCCGCCGCCTCCCCCA
CACACTTCGGGACCTAAGTTGTCAGTACTCTCCATAACGGCCTCGGATATCGACACTATT
ATGGAAATCGTAAAAGAGATACTGCCCAATCTGGCTGACGCCTCAGGGCCAGGTTCAGGG
ACGAAACACGGCGGCAGTAGTGACGACTTGGACGTCCGTCTGTTGATACATCAGAGCCGG
GCCGGTTGTGTGATTGGGAAGGCTGGTGCGAAGATCAAGGAGCTCAGAGAGGTAGGTCTT
AATGGATACCATCAAACTTAA
Protein sequence:
MKRDAYGDDGPMQKRQRHSDDEVTFLIPSKVAGSIIGKGGANISKLRNEPVTGSYCPREV
SVNVAGRTARLHTNRPTIINCTLNLTLPGHSTVSRFIPDPMTSRPSTPSPPPPLPPPPPP
HTSGPKLSVLSITASDIDTIMEIVKEILPNLADASGPGSGTKHGGSSDDLDVRLLIHQSR
AGCVIGKAGAKIKELREVGLNGYHQT