| New model in OGS2.0 | DPOGS210778 |
|---|---|
| Genomic Position | scaffold6964:+ 967-7182 |
| See gene structure | |
| CDS Length | 1437 |
| Paired RNAseq reads | 520 |
| Single RNAseq reads | 1537 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004216 (8e-135) |
| Best Drosophila hit | CG5226 (9e-134) |
| Best Human hit | orphan sodium- and chloride-dependent neurotransmitter transporter NTT73 isoform 1 (8e-59) |
| Best NR hit (blastp) | GI18448 [Drosophila mojavensis] (3e-157) |
| Best NR hit (blastx) | GI18448 [Drosophila mojavensis] (1e-145) |
| GeneOntology terms | GO:0005215 transporter activity GO:0005887 integral to plasma membrane GO:0005328 neurotransmitter:sodium symporter activity GO:0006836 neurotransmitter transport GO:0005326 neurotransmitter transporter activity GO:0005886 plasma membrane |
| InterPro families | IPR000175 Sodium:neurotransmitter symporter |
| Orthology group | MCL11232 |
Nucleotide sequence:
CTCGCAAAGCTCTTAGACCCGACCGTGTGGTTGGACGCGGCTACCCAGGTTTTCTATTCG
TTCGGGCTCGCGTTCGGTTCGTTGATAGCGTTCGGTTCCTACAATACACCGAACAATAAC
TGTGTCCGCGACGTCCTGCTCGTGTCGGTGTGTAACGCGCTCACAGCCATATACGCTTCC
GTGGTTATATTCAGCATCCTCGGCTTCAAAGCCTTCACCATGGTGGAGAAATGCGTCAGC
AAGGAGATCAAAGTTCTAGCACTGCATCATATCGGTGGGTTCACACTGAACTCCAGCCAG
GAGTTCTATGACGAACACTACCCGCAGCTCAGCGCTAACATCACAACCGCCCTCAATCTG
ACCGGCTGCACGATGAGCAAGCAGTTGGATGAGGCTGCTGAAGGGACTGGTTTAGCGTTT
ATAGTTTTCACCCAAGCTATTCTCAAGTTGACACCGGCTCCGTTCTGGTCCATAATTTTC
TTCTTGATGCTGCTGTCTCTGGGTCTAGGAAGTCAGATTGGTATCATGGAAGGCATGTTG
TGCACTATCTTCGATATTGATTTCTTCAAAAGATTCAGCAAACCTGTTATCACTGGTGCT
GTATGCACGCTATGTTTTTTCGTGGGTCTCATCTTCACTACGGGAGCTGGGGAGTACTGG
CTCAAGATGTTCGATTCATTCGCTGGTACCATCGGTCTGGTGGTGGTGGCACTGCTTGAA
ATGGTATCCGTCATATACATATACGGACATGAGAGGTTCACCAACGACATCTACGAGATG
ACGGGCTACCGTCCAGGATGGTACTGGCAGGTCACCTGGCGCTACATAGGACCGGTCATA
GTCTCATGCATCCTAGTGTCTTCTTTAATCTTCATGTTGTTGAACCCGCCCATGTATGGA
GCCTGGAACGCTGAGGAGGGTCGTGTGGAGAAGACGCCTTACCCCCCGTGGGTGCTGTTT
ATCGCGGTGGCGATGATACTAGCTGGGATCCTCCCCATCCCGGTGGTGCTCCTCCTCAGA
CGGTTCCAATGCTTGGCTCTGGATGTAGACATCCACCAGGGCTCCATCAGGAGAATCGAA
ACCACCGTCTCCACCAAGGAGATGATGAGCGATCAAGATGTGTTGTCTCCAGAGAGTGTG
CCGCCGTCGCAGCTGCTGCCTGATGCCGCCAGATTCACCATTGGAGACTTTGATGTAAGG
GGGCGTGGACAGCAGCGACGAGAGGCCTACTCGCCTGCCAACAAGCATCGTGCGAAGACC
GAAGAAATAAATTCTTCCGATTCGGAGAGTCAGGTCCGAGCCACCGACCGTTACGAAGAT
TCTAGTAGTGACGATGAAATTTTGAACGCGAAGTATTCAACCGGAACAGGAATACGTCTC
TCCATGAAACCCATCGGTCACAATCCCAACGCATTCAAAATGGACGTCGTCGACTGA
Protein sequence:
LAKLLDPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPNNNCVRDVLLVSVCNALTAIYAS
VVIFSILGFKAFTMVEKCVSKEIKVLALHHIGGFTLNSSQEFYDEHYPQLSANITTALNL
TGCTMSKQLDEAAEGTGLAFIVFTQAILKLTPAPFWSIIFFLMLLSLGLGSQIGIMEGML
CTIFDIDFFKRFSKPVITGAVCTLCFFVGLIFTTGAGEYWLKMFDSFAGTIGLVVVALLE
MVSVIYIYGHERFTNDIYEMTGYRPGWYWQVTWRYIGPVIVSCILVSSLIFMLLNPPMYG
AWNAEEGRVEKTPYPPWVLFIAVAMILAGILPIPVVLLLRRFQCLALDVDIHQGSIRRIE
TTVSTKEMMSDQDVLSPESVPPSQLLPDAARFTIGDFDVRGRGQQRREAYSPANKHRAKT
EEINSSDSESQVRATDRYEDSSSDDEILNAKYSTGTGIRLSMKPIGHNPNAFKMDVVD