| New model in OGS2.0 | DPOGS201616 |
|---|---|
| Genomic Position | scaffold8742:- 1186-6870 |
| See gene structure | |
| CDS Length | 1203 |
| Paired RNAseq reads | 200 |
| Single RNAseq reads | 492 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009447 (9e-51) |
| Best Drosophila hit | CG6839 (3e-43) |
| Best Human hit | ND |
| Best NR hit (blastp) | putative dsRNase [Spodoptera littoralis] (1e-64) |
| Best NR hit (blastx) | putative dsRNase [Spodoptera littoralis] (4e-63) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0046872 metal ion binding GO:0016787 hydrolase activity |
| InterPro families | IPR001604 DNA/RNA non-specific endonuclease IPR020821 Extracellular Endonuclease, subunit A |
| Orthology group | MCL19904 |
Nucleotide sequence:
ATGACACTACCCAGGGCCTGTGTATTGTTGTTCGTCACTTTAAATGTTCTCAACGAAGCC
GTTGGAGGCTGCATTCTATCGTTAAAAAAGGATTTTCCGAAGACCTCAGTGGTATATTTA
CGTCATGGCCGTCTCCTGTCACCGGACGCTGTCACCGGTGACGTTCAGCTGACACGTTCG
GAAACACTCCAAGTAGCATGTCCGGGAGAACAAAAATACATTGTACTTAGCAATAAAACC
ACCAATCACAGCTTACTTGACGTGAAATGCGTTTCAGACAGCTTGTTCCGCGCGAGTAGA
CTGTCTTGGATAGGGAACTTCAGCGAGATCAGATGTAACGCGCCGCCCTGGACCAGCGCT
GAGGAGGTCGGGGGATGCGGAGCAGGAGCCAAGAATTATAGGATCGGGTATAAGGTGTCA
GGTCATTTCCACGGCCTGTACGAGGCGTGTTTCAACAAAGATCTCCTCAGCACTCTCTAT
GTGAAACAGGAGCTGGGTCCAGAGAGCGTCTTCATTCAGTCGGGGGGTAGACCCAACTTT
GTGGAACAAGATTTCTTCGGAAAAGTGAAGATGTCAAAACTCTACCACCTCACCAACCAG
AAGGCGAGATTCAAGCAGGTCCTTGGCGAGGGGAAGGAGGAGGAATATCTGACTAAGAAA
CAGTATCTGACCCGCGGACATCTCTCCCCCCGGGCCGACCACTCCCTGCTCTGTTCTCAG
CGCGCCTCTTTCCTGTACCTGAACACGGCTCCTCAATGGAGACGGGGCAACGCCGGTGAT
TGGGCCGCCTTGGAAGAGGCTCTGCGCCGCAGAGTCCACAGCTACGGCCGTCCGGTGACG
GTGTACACTGGCACCTTCGGAGTATCGACCCTGGGGGACACCTCCTCGAGACAGCAGCAG
CTCTATCTAAGCGTGGATCAGAACAATAACGGGATCCTGCCCGTCCCGCTGTATTATTAT
AAGGTTGTGTTCGACGCCGTCAACAACACGGCCGCGGCGTTCGTGTCGATCAACTCGTCT
TACTACAACCAAACCATGATCGAGAAGCTGACCTTCTGCGAGGACATCTGCGGCAGCAGG
AACTACTCCTGGCTGAGGTGGAGGTCCAGCGACGGCACACACAGCTTCTGCTGCGAGTAC
CATGACTTCGTCAAAACGGTCCATGACCTACCCGGATTGAAGGTCGAAGGCTTATTTTAT
TGA
Protein sequence:
MTLPRACVLLFVTLNVLNEAVGGCILSLKKDFPKTSVVYLRHGRLLSPDAVTGDVQLTRS
ETLQVACPGEQKYIVLSNKTTNHSLLDVKCVSDSLFRASRLSWIGNFSEIRCNAPPWTSA
EEVGGCGAGAKNYRIGYKVSGHFHGLYEACFNKDLLSTLYVKQELGPESVFIQSGGRPNF
VEQDFFGKVKMSKLYHLTNQKARFKQVLGEGKEEEYLTKKQYLTRGHLSPRADHSLLCSQ
RASFLYLNTAPQWRRGNAGDWAALEEALRRRVHSYGRPVTVYTGTFGVSTLGDTSSRQQQ
LYLSVDQNNNGILPVPLYYYKVVFDAVNNTAAAFVSINSSYYNQTMIEKLTFCEDICGSR
NYSWLRWRSSDGTHSFCCEYHDFVKTVHDLPGLKVEGLFY