| Genomic Position | scaffold446:- 157004-159469 |
|---|---|
| See gene structure | |
| CDS Length | 1179 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 297 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (1e-52) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (4e-54) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase IPR005135 Endonuclease/exonuclease/phosphatase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGTTTCTAATTTTAAAATTAACTGTCAACATAACGAAATCTAAGTTTTTGAACTGTCTG
TTTATAAGATATAATTTCTATCAGATATTACTTGATAGTCCCGCGACAGACACACTTAAA
AATAATGATGTAAGAGCAAAACGGGAACTAGAAGATTTAGAAAATGATGATGAATTTGCA
CTACCTTCATCCCCTGGAATGGAAGAGGAACCTGGTTTTTGGGATAGAGTCGTTCAAGTA
TATACGCCGACTTCGTCACACCCAGATGAGGAAGTAGAGTCTATGTATGAGAACATTAGC
AGGGCCATACATACTAGCAAAACTCACTTCAATGTTGTTTTGGGAGACTTTAATGTGAAG
CTGGGCAAGATAAGTGTTTACGAATTGAAGAAGCCGCCTCAACGAAAATGGACTTGGATG
AGCCCCGATAGTTCCACGAGAAATGAGATAGACTTCATTATGACCGATAAGAGACGAATA
TTCTATAAGATCTCAGTGATTCACAGAGTGAAAACCGGTAATGATCACCGAATTGTGTTA
GGCACGTTGAATATAAACGTTAAACTGGAACGGTCCCATTTAATGAAGTCCACGCACCGA
CCTACTCGCGCTCAGATCGAAAACCCCGAAAGCTGTCAACTCGAGCTTTCAAATCGCATT
GATTGCCTGAAGTTCACGCATCGGTTGACGAGATCAACAACAGAAACGCCACTGTGTCGG
TCTGACTTCAGAAACGGATCGAGGGCGATTCCCTTAAAAAGAGGCGTAAGACAGGGAGAC
GTCATATCTCCGAAACTGTTCAAGGCCGCTTTGGAAGACGCCTTCAAGCTTCTGGAATGG
GAAGGACTGGGGATCAATATTAACGGCGAATACATTACTCACCTTCGGTTTGCCGACGAT
ATCGTAGTCATGGCAAAATCGATGGATGAACTCAGTACGATGCTCGAAAGCCTCAATCGA
GTCTCCCAACGGCTAGGTCTTAAAATGAACATGGACAAGACGAAACTCATGTCTAATGTC
CATGTCACACCTACCCGTGTTATGGTTGAGAACTCGGTACTTGAAGTTGTTGACGCGTAT
GTATACCTGGGACAGACAGTCCAGTTAGGAAGGTCCAACTTCGAGAAAGGTCAATCGCCA
AGTCCAGCTCGGATGGGCAGCGTTCGGGAAGCTCCGTAA
Protein sequence:
MFLILKLTVNITKSKFLNCLFIRYNFYQILLDSPATDTLKNNDVRAKRELEDLENDDEFA
LPSSPGMEEEPGFWDRVVQVYTPTSSHPDEEVESMYENISRAIHTSKTHFNVVLGDFNVK
LGKISVYELKKPPQRKWTWMSPDSSTRNEIDFIMTDKRRIFYKISVIHRVKTGNDHRIVL
GTLNINVKLERSHLMKSTHRPTRAQIENPESCQLELSNRIDCLKFTHRLTRSTTETPLCR
SDFRNGSRAIPLKRGVRQGDVISPKLFKAALEDAFKLLEWEGLGININGEYITHLRFADD
IVVMAKSMDELSTMLESLNRVSQRLGLKMNMDKTKLMSNVHVTPTRVMVENSVLEVVDAY
VYLGQTVQLGRSNFEKGQSPSPARMGSVREAP