| New model in OGS2.0 | DPOGS215593 |
|---|---|
| Genomic Position | scaffold446:+ 21518-23353 |
| See gene structure | |
| CDS Length | 1836 |
| Paired RNAseq reads | 735 |
| Single RNAseq reads | 1860 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000351 (1e-13) |
| Best Drosophila hit | yurt, isoform A (3e-145) |
| Best Human hit | band 4.1-like protein 5 isoform 1 (1e-116) |
| Best NR hit (blastp) | band 4.1-like protein 5 [Culex quinquefasciatus] (1e-171) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC015016 [Tribolium castaneum] (1e-158) |
| GeneOntology terms | GO:0008092 cytoskeletal protein binding GO:0007391 dorsal closure GO:0007390 germ-band shortening GO:0046665 amnioserosa maintenance GO:0008258 head involution GO:0005856 cytoskeleton GO:0005737 cytoplasm GO:0019898 extrinsic to membrane |
| InterPro families | IPR019748 FERM central domain IPR018979 FERM, N-terminal IPR014847 FERM adjacent (FA) IPR018980 FERM, C-terminal PH-like domain IPR019747 FERM conserved site IPR000299 FERM domain IPR019750 Band 4.1 family IPR000798 Ezrin/radixin/moesin family IPR019749 Band 4.1 domain IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle IPR011993 Pleckstrin homology-type |
| Orthology group | MCL12616 |
Nucleotide sequence:
ATGTTGCTTGATGATACTGACTTATCTATTAATCTATCTAAAAAGGCTAGTGCAGGAGAT
CTTTATGAACAAGTCTTTTATTCTCTTGATTTGATTGAGAAAGATTATTTTGGCTTACAA
TTCACTGATACAAATAATGTTAAGCATTGGTTGGACCCAACAAAAACCATTAAAAAGCAA
GTAAAAATAGGACCACCTTACACTTTAAGACTGAAGGTTAAATTTTATTCATCTGAGCCT
AACAATTTAAGAGAAGAGCTCACAAGATATCAGTTTTTCCTACAATTGAAAAAAGATATC
TTAGAAAGTAAGCTGGAATGCCCACATTCTACTGCAGTTGAATTGGCAGCTTTGGCTTTG
CAATCTGAATTGGGTGATTTTGATGAAACTATACACACCCCAGCTACAGTATCTGAATTC
CGTTTTGTCCCGAATCAAACAGAAGAAATGGAAATCGAAATATTAGAAGAATTTAAAAAA
TGCAAAAATCTCACACCAGCCCAAGCTGAAGTCAACTATCTTAATAAAGCAAAGTGGCTT
GAAATGTATGGTGTTGATATGCACATTGTGTTGGGAAAAGATGGGTGTGAATATCATCTT
GGTTTAACACCAACGGGAATTCTTGTTTTTGAAGGACCCCAGAAAATCGGTCTCTTCTTT
TGGCCAGTCGAAGACGACGACCAAGGACGCGAACAGGAACATACATTTGTATTTCGACTA
CACAATGAGAAGGCCTGTAAACATCTTTGGAAATGTGCTGTAGAACATCACACTTTCTTC
CGCTTACGAGCTCCAGTGAAAGGTCCATCGGCAAGACAAAACTTCTTCAGAATGGGCTCA
AGATTTCAATATTCAGGTAAAACTGAATACCAAACCACACAACAAAATCGTGCGCGTAGA
ACTGTTCAATTTGAGCGTAGGCCTAGTCAGCGGTTTGCTCGTAGACAGAGTCATGTGTTA
AGGGAACGAGAAAAGCAAAATACATCTACAAAGACAGAAACGGTTGCACAACCAGAGCCG
AGTACTTCCGCAGAAACTACGGCGGTGGTGAATGAAAATGTTAATGCTCTTGATACATTA
TCTCGTAAGAGCAGTGCCAAATCACAAAAGTCTTCGCTGATTGATAGCGATTATAAAATG
ACTGAAGTAGGAGAACCATCGACCAAGAATCTTGTAGATGACGACACGCAAGACGAAGTT
CACATATCAAAGGAAGACGCTATTAACAATAAGGTTCTGTTTAAAATGGACAAGTGTGAA
GAAAAGAAAAACAATTTAACACAACTGGTTATTAATAAGCCGCCTTGCAATTGTTCTCCA
GTTGCAGAGTTTAATCCATTAAATGATCTCTTAATGAGCTTGGTGAAGGACAAATTGAAC
ACGGACGACGCTAAAAACGTAAACACAAAAGACCAGGATTCAGTAGACAACGAGGTACCT
AACAATCAAAATAAATTTATGCTTGGCTCAAAGAAAAATCTCCCACCTGGTCAGCTAAAA
TGCAATAACATACTCAAAGCTCGGGAGAATGAAGTTAAGATAATAAACGAATCGTCAAAC
ATGAACCTATCAATTCCGTCAACGCCGTCACCTAAGATAATAAATGAAAATAATACCCAA
TACGTATCTATTGTTGTTGTTGAACCTCCGCATTCACAAGTGAAGGTAGCGTCACCTAAA
CCGGTGGAGAGACAAGAGGAAATCGCTCCTAAATCCCAACCTATATCATCTCTATCACCG
TGGCTGGTGACGTCAGAGCCCAGTTCACCGTCCGGTATCGGAGAGAAGGAGATAACTATC
ATTCACAGAAAATCAGTTATAACAACCCAACTTTAA
Protein sequence:
MLLDDTDLSINLSKKASAGDLYEQVFYSLDLIEKDYFGLQFTDTNNVKHWLDPTKTIKKQ
VKIGPPYTLRLKVKFYSSEPNNLREELTRYQFFLQLKKDILESKLECPHSTAVELAALAL
QSELGDFDETIHTPATVSEFRFVPNQTEEMEIEILEEFKKCKNLTPAQAEVNYLNKAKWL
EMYGVDMHIVLGKDGCEYHLGLTPTGILVFEGPQKIGLFFWPVEDDDQGREQEHTFVFRL
HNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQNFFRMGSRFQYSGKTEYQTTQQNRARR
TVQFERRPSQRFARRQSHVLREREKQNTSTKTETVAQPEPSTSAETTAVVNENVNALDTL
SRKSSAKSQKSSLIDSDYKMTEVGEPSTKNLVDDDTQDEVHISKEDAINNKVLFKMDKCE
EKKNNLTQLVINKPPCNCSPVAEFNPLNDLLMSLVKDKLNTDDAKNVNTKDQDSVDNEVP
NNQNKFMLGSKKNLPPGQLKCNNILKARENEVKIINESSNMNLSIPSTPSPKIINENNTQ
YVSIVVVEPPHSQVKVASPKPVERQEEIAPKSQPISSLSPWLVTSEPSSPSGIGEKEITI
IHRKSVITTQL