| New model in OGS2.0 | DPOGS215599 |
|---|---|
| Genomic Position | scaffold446:+ 99890-102908 |
| See gene structure | |
| CDS Length | 1122 |
| Paired RNAseq reads | 651 |
| Single RNAseq reads | 2428 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000353 (4e-171) |
| Best Drosophila hit | Gram-negative bacteria binding protein 1 (7e-33) |
| Best Human hit | ND |
| Best NR hit (blastp) | beta-1,3-glucanase [Colias eurytheme] (0.0) |
| Best NR hit (blastx) | beta-1,3-glucanase [Colias eurytheme] (0.0) |
| GeneOntology terms | GO:0005576 extracellular region GO:0045088 regulation of innate immune response GO:0051635 bacterial cell surface binding |
| InterPro families | IPR000757 Glycoside hydrolase, family 16 IPR008985 Concanavalin A-like lectin/glucanase IPR013320 Concanavalin A-like lectin/glucanase, subgroup |
| Orthology group | MCL18263 |
Nucleotide sequence:
ATGTGGTTCCTAGTAGCGGTATCGTTGTTTGCGGGGGCGCAGGCCTGTGTTCCAAGTGTG
ACCACAGTCAGTGGGACCCACGCACCGATCACTGTTTGCTCGGGGGCCATGATATTCGCG
GACGACTTCGAAGAATTTGACCTTGAGAAATGGCAACACGAAAACACTTTGGCTGGTGGT
GGTAACTGGGAGTTCCAATACTACAATAACAATAGAACTAATTCGTTCACTCAAGACGGC
AAGTTGTTTATTCGTCCGTCCCTGACTTCTGACCAATTTGGAGAAAACTTCCTACACACT
GCCACTCTCAATATCGAAGGTGGAGCACCAGCTGATAGATGCACCAACCCACAATGGTAT
GGTTGTGAACGTACTGGAACTCCAAACAATATTATAAACCCCATAAAAAGCGCTCGCATC
CGAACAGTTAACTCCTTCAGCTTCCGTTATGGAAGAGTGGAGGTGCGCGCTAAAATGCCT
GCAGGAGACTGGTTATGGCCTGCTATTTGGTTAATGCCAGCGTACAATTCATATGGCACG
TGGCCAGCGTCTGGAGAAATTGATCTTGTGGAATCCCGCGGTAACCGTAACATGATTCAG
AACGGACTTCACATTGGAACACAAGAAGCTGGGTCTACTTTACATTTCGGACCGTACCCT
GATTGGAACGGTTGGGAAACAGCTCACTGGGTTAGACGTAACCAAGGAGGATATGATTAC
GACTTTCATCGCTACCAGCTCGAGTGGACTCCAGATTACATAAAATTCAGCCTTGACGAT
GTTGAGCTAGGGCGAGTAACGCCTGGAAACAAGGGCTTTTGGGAATACGGTGGATTTAGC
AAGAATCCCAACGTACTTAATCCCTGGCGATACGGTTCGAAAATGGCGCCATTCGACCAA
AAGTTTTACATAATCATCAACTTGGCTGTCGGTGGTACCAATGGATTCTTTCCCGACAAC
GTATTTAATCCTACACCAAAACCCTGGTCCAACAATTCTCCTCGTGCCGCAACTGACTTC
TGGAATGGCCGCAATTCCTGGCTGCCAACCTGGATGCTCGATCAAAACGAGGGACATTCG
GCTTCTTTACAAGTGGATTATGTGAGAGTCTGGGCATTGTAG
Protein sequence:
MWFLVAVSLFAGAQACVPSVTTVSGTHAPITVCSGAMIFADDFEEFDLEKWQHENTLAGG
GNWEFQYYNNNRTNSFTQDGKLFIRPSLTSDQFGENFLHTATLNIEGGAPADRCTNPQWY
GCERTGTPNNIINPIKSARIRTVNSFSFRYGRVEVRAKMPAGDWLWPAIWLMPAYNSYGT
WPASGEIDLVESRGNRNMIQNGLHIGTQEAGSTLHFGPYPDWNGWETAHWVRRNQGGYDY
DFHRYQLEWTPDYIKFSLDDVELGRVTPGNKGFWEYGGFSKNPNVLNPWRYGSKMAPFDQ
KFYIIINLAVGGTNGFFPDNVFNPTPKPWSNNSPRAATDFWNGRNSWLPTWMLDQNEGHS
ASLQVDYVRVWAL