New model in OGS2.0 | DPOGS208369  |
---|---|
Genomic Position | scaffold11:- 141509-150187 |
See gene structure | |
CDS Length | 2358 |
Paired RNAseq reads   | 2199 |
Single RNAseq reads   | 5283 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012223 (0.0) |
Best Drosophila hit   | CG2658, isoform A (0.0) |
Best Human hit | paraplegin isoform 1 (4e-176) |
Best NR hit (blastp)   | PREDICTED: similar to paraplegin [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to paraplegin [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0008237 metallopeptidase activity GO:0006508 proteolysis GO:0005739 mitochondrion GO:0016887 ATPase activity GO:0004222 metalloendopeptidase activity GO:0008270 zinc ion binding GO:0005524 ATP binding GO:0016021 integral to membrane GO:0030163 protein catabolic process |
InterPro families    | IPR000642 Peptidase M41 IPR003959 ATPase, AAA-type, core IPR005936 Peptidase M41, FtsH IPR003593 ATPase, AAA+ type, core |
Orthology group | MCL12237 |
Nucleotide sequence:
ATGTTATTAATCAAGCGACTACCAGCGCTTTCAGCATCAAAAATTAATTTAAAAGTACCG
TATCTTGAAAAAAATGTGATCCTCGAGAGGCAAATTAGTAAACACTGCCACTATAATTTG
TTAAAGTTATGTAAATCTGCATCAGTACTACATAATTTAACCCACAAATCTAAAAATCCA
CAACTTCGGCAGTTCCATGCAGAATATAAGGCAGCCTTTGCTTTGCTGCAGAGATCAAAT
TTTTTAGGATTTGGTTCCTTTTTAAATACAAATTCAAGAAGGTTGCATACAAATTCCCCA
AATCAAAACAGGAAAAATGAAGACAATGACGATAAGGAGAAAAAGAAAGAAAACGATAAA
GGGACAATGCCATCATTATTACTGAAGGCGGCATTTTGGATGCTCACAACATTTACCTTA
ATAATGCTCAGCTCATTTCTTGTACCAGGAGACAACACACAAAATGAGTTAATCCGTTAC
GTGTCGTGGAACGAGTTCGTATATTCGATGTTATCAAAGGGGGAAGTTGAGGAATTGATA
GTCCGACCAGATTTAGAGGTGGTCACCATTATATTACACGAAGGTGCTGTCATAAAAGGC
AAAAGATCAAACCATCGAGTTTTCCACATGAATGTTGGTGACATTCATCGGTTTGAAGAG
AAACTGAGAGAGACAGAACTCGGCCTAGGGGTTAAGGAAGGAGTTCGTGTAATATATGAT
AGGAATGGAAGTGTCGCTGGGAAAATTATTACAAGCCTTCTGATAGCCGCTATTATTATG
TCCTTCCTCTATTCAACTAAGTCAATGAGGATGAATATAAACTTGGGTGGATTTAGTCAG
TTGAGGCGTGCCAAATTCACTCTAGTTGATTCTATGAGCGGTCAAGGGAAGGGTGTTAAG
TTTGAGGACGTGGCCGGCCTGAAGGAAGCCAAGATAGAGGTTATGGAGTTTGTTGACTAC
TTGAAGCGACCAGAGCATTACAGAAGCTTAGGTGCTAAGGTGCCCAAGGGAGCTCTGTTA
CTTGGTCCACCGGGTTGTGGTAAGACGTTACTTGCTAAGGCTGTGGCTACGGAAGCTAAT
GTACCATTTCTCTCTATGAACGGATCAGAGTTCATCGAAATGATCGGAGGCTTGGGAGCG
GCGAGAGTCAGGGATCTGTTCAAAGAGGCGAGCTCGAGAGCACCCTGTATAATATATATC
GACGAAATGGATGCCGTTGGTCGTGCGAGGTCATCCGGCACTTCCTCCTGGGGTCCCGGC
GGTGGGGAGGGGGAACAGACCCTCAATCAGTTGCTGGTAGAAATGGACGGCATGAAAAGC
AGGGAGGGGGTCGTTGTATTAGCCAGCACCAACAGAGCTGATGTACTAGATAAGGCGCTA
CTCCGTCCGGGACGGTTCGACAGACACATCCTCATAGATTTACCGACTTTGTTAGAACGA
GAAGAAATCTTCGAGAGGCATTTGAAGAACATAGTACTTGAGAAGTTGCCACCTTATTAT
GTTAAACGTCTTGCGTATTTAACGCCTGGATTCAGTGGCGCTGATATAGCTAACGTTTGT
AACGAGGCGGCCTTACACGCTGCTAGATTCAAGCAAAGTATAGTGAAGGCTTCGGATCTG
GAATACGCCGTCGAGAGGGTCGTCGGTGGTACGGAAAAACGAAGTCACGCTATTTCACCG
GCTGAGAAGCGTGTCATAGCTTACCATGAGGCGGGACACGCTCTGGTCGGCTGGCTGCTA
GAACATACGGACGCCTTGCTCAAGGTCACGATCGTGCCGCGTACCAATAAAGCATTGGGC
TTCGCTCAATACACGACATCAGATCAAAAACTGTACTCCAAGGAAGAGTTGTTCGATCGC
ATGTGTATGGCGTTGGGCGGTCGGGCGGCCGAGGCGATAACATTCAACTCTGTAACCAGC
GGAGCCCAGAACGACCTTGAGAAGGTCACCAAAATAGCATACGCACAGGTCCGTGTTTTC
GGCATGTCGCCGAGCGTAGGGTTGGTTTCTTTCCCCGATGTCAAAGAGCACCAGAGGAGT
CCATTCAGCAAGGCTCTGAAGAACCTCATAGATATGGAGGCGAGACAGCTGATCGCTAAA
GCCTACTACAGGACCGAGGAGCTCTTGAAACGGAATGAGAACAAACTGAAATTACTCGCC
GAGGAACTTATAAAGAAAGAAACGCTCAACTACAAGGACGTTGAGGCTATTCTAGGCAAG
CCTCCGTTCGCCAAGAAATTCATAGATCCGATAGAGTTCGAACAGAATCTAAGGAACATG
GAACACGTCGCTAAAACCGGAGACGATGACGTCGGCGCGGCCTCAGCCAAACCCACCGCA
AACAACGGCCTTCACTAG
Protein sequence:
MLLIKRLPALSASKINLKVPYLEKNVILERQISKHCHYNLLKLCKSASVLHNLTHKSKNP
QLRQFHAEYKAAFALLQRSNFLGFGSFLNTNSRRLHTNSPNQNRKNEDNDDKEKKKENDK
GTMPSLLLKAAFWMLTTFTLIMLSSFLVPGDNTQNELIRYVSWNEFVYSMLSKGEVEELI
VRPDLEVVTIILHEGAVIKGKRSNHRVFHMNVGDIHRFEEKLRETELGLGVKEGVRVIYD
RNGSVAGKIITSLLIAAIIMSFLYSTKSMRMNINLGGFSQLRRAKFTLVDSMSGQGKGVK
FEDVAGLKEAKIEVMEFVDYLKRPEHYRSLGAKVPKGALLLGPPGCGKTLLAKAVATEAN
VPFLSMNGSEFIEMIGGLGAARVRDLFKEASSRAPCIIYIDEMDAVGRARSSGTSSWGPG
GGEGEQTLNQLLVEMDGMKSREGVVVLASTNRADVLDKALLRPGRFDRHILIDLPTLLER
EEIFERHLKNIVLEKLPPYYVKRLAYLTPGFSGADIANVCNEAALHAARFKQSIVKASDL
EYAVERVVGGTEKRSHAISPAEKRVIAYHEAGHALVGWLLEHTDALLKVTIVPRTNKALG
FAQYTTSDQKLYSKEELFDRMCMALGGRAAEAITFNSVTSGAQNDLEKVTKIAYAQVRVF
GMSPSVGLVSFPDVKEHQRSPFSKALKNLIDMEARQLIAKAYYRTEELLKRNENKLKLLA
EELIKKETLNYKDVEAILGKPPFAKKFIDPIEFEQNLRNMEHVAKTGDDDVGAASAKPTA
NNGLH