DPGLEAN03912 in OGS1.0

New model in OGS2.0DPOGS208370 
Genomic Positionscaffold11:- 6323-9652
See gene structure
CDS Length633
Paired RNAseq reads  60
Single RNAseq reads  228
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA011593 (4e-24)
Best Drosophila hit  succinate dehydrogenase C (1e-14)
Best Human hitsuccinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 1 precursor (2e-13)
Best NR hit (blastp)  PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum] (9e-25)
Best NR hit (blastx)  PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum] (5e-21)
GeneOntology terms







  
GO:0006105 succinate metabolic process
GO:0006121 mitochondrial electron transport, succinate to ubiquinone
GO:0000104 succinate dehydrogenase activity
GO:0005749 mitochondrial respiratory chain complex II
GO:0006099 tricarboxylic acid cycle
GO:0008177 succinate dehydrogenase (ubiquinone) activity
GO:0009055 electron carrier activity
GO:0006979 response to oxidative stress
GO:0008340 determination of adult lifespan
InterPro families
  
IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
IPR014314 Succinate dehydrogenase, cytochrome b556 subunit
Orthology groupND

Nucleotide sequence:

ATGTTGAATATAGTAATTAAATATCATTGCTGCAAAGAAACATCGAGTTTTATGAGATTA
TTGAATAAAAACAGGTCGATTTTCGGGCCACAGTCATCGATTGTGGGTTGCAATTTTCTG
AGATATAAAGGAGTTTGTCCTCCCGCAAGTTCAGGGCCTGGTGCAGCCAAAGGCTCAGGT
CCTGGAAAGGGCGCCAAACATAAGATAACATATCAACCTTACACCGCGCCGCCACCAACG
TGCCATGATTTTAAAAATATGAGTTTAAACCGCCCTATGTCTCCACATCTAACGATTTTC
GCTCCCACCCTACCCGCTATGACATCCATTGTTCAGCGTATTACAGGCATGATAATAACG
TTTTACGCTCTCCTCCTATCCTCTGGAAGTTTGTTCCTGTCGAACGGCGTAGAAACATAC
GTGTCTATTATCCAGAGCTTTGATTTTTCCTTACCTATGGTATTTATTATTAAGATGATG
TTAGGTGCGCCGTTTGTCTATCATTATTTCAACGGTATCCGTTTCGTTATGTGGAATGCT
GGTAAGTGGTTGTCCATCAAAGAAGTTTACGATTCAGCTAAGAAGAGTTTTGTTGCGACA
GCCGTATTAACATTGCTTTTCTCCATAATTTAA

Protein sequence:

MLNIVIKYHCCKETSSFMRLLNKNRSIFGPQSSIVGCNFLRYKGVCPPASSGPGAAKGSG
PGKGAKHKITYQPYTAPPPTCHDFKNMSLNRPMSPHLTIFAPTLPAMTSIVQRITGMIIT
FYALLLSSGSLFLSNGVETYVSIIQSFDFSLPMVFIIKMMLGAPFVYHYFNGIRFVMWNA
GKWLSIKEVYDSAKKSFVATAVLTLLFSII