New model in OGS2.0 | DPOGS200350  |
---|---|
Genomic Position | scaffold5014:- 6501-8153 |
See gene structure | |
CDS Length | 1104 |
Paired RNAseq reads   | 2103 |
Single RNAseq reads   | 4299 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005643 (4e-91) |
Best Drosophila hit   | washout (1e-15) |
Best Human hit | WAS protein family homolog 1 (3e-29) |
Best NR hit (blastp)   | putative WAS protein family homologue 1 [Heliconius melpomene] (5e-111) |
Best NR hit (blastx)   | putative WAS protein family homologue 1 [Heliconius melpomene] (1e-108) |
GeneOntology terms    | GO:0005769 early endosome GO:0016197 endosome transport GO:0034314 Arp2/3 complex-mediated actin nucleation GO:0042147 retrograde transport, endosome to Golgi GO:0043014 alpha-tubulin binding GO:0055037 recycling endosome GO:0071203 WASH complex |
InterPro families   | IPR021854 WASH complex, subunit WASH |
Orthology group | MCL10857 |
Nucleotide sequence:
ATGGAGGGTCTTTATAAAATTAATTTGATACCCAACGACCTTAGCGTCGAAGAAACCGTG
TTACAAATAGCCGATACATTAGACAATCTGAATGGGATAGTTGACGATGTTTTTAAACGT
ATATCAAATAAAATTAAAATCAACGTTGAAAAGACGTCGAAACTTCAGGAGAGAATCAAT
GTATCCAGGACAAAAGTTGAAAAACTTGCCGGGACACAGAAGGCGATCAAAGTATTTTCA
AGCGCTAAATACCCGTCGTCTATAACACACGAACATTACAAATCCATTTTCGAATCAAAC
GATTATAATTATGAACCCAAAAACGTTATACCAACCGGAAAATCCAACAGACAGACAAAC
GAAAAAGCCATCCAGGAGAAACTTCATTTCTTCCACGTGAAAGTCGCTGAACCTAAAAAT
AATAAAACCAGGAACGATTTCGATCTGAATACGGTTTTGAATTCAATAACATCAATCGGA
GATCTCCTTATATACAAGAGCGACGAGAGCCCGTACTTTGGTAGTAAAACCAAAGGGCAG
ACTTACGTGCCCAAAGTAAACACGACCGTAGATAAGGGCTCGTTGGACGAAGCACCACCC
TCTATTGTGAAAAAGAATCTGTTGAAGCGAGAAATCGACGAGTACATGTACGCTCCAGGA
ATGGGCTTGGTGCCAGAATTGGACATGCCCCTGGATCTTCCACATCTTCCCGGTATAGCC
GGGGACGTTCAGTATTCGGTTACTGGGGATGGGTCTATAGCGCCATCAGCTGTTACATCA
CCCGTCGCCATCACAAACCCCATAACAGAATCCGTGCTAGATCTTCCGGATTTACAAATA
CTCCCAGACTTGCCGGTTACCTCGGATACTCAATATGTACCTGAACTTGTAAATCCTCCT
GTTAAAGACGTTCAGGACACGCTCGACGCTCCGAAAATCAGAGTCGAGGAGCCTCCAGCG
TTACCTTCGACCCCCCCTCCGCCTCCCCCGCCCCCGCCGCCACCACCCCCGCCGCCAATG
GAGATCACACAAACGCCAAAAAGGTTCAAACTGATTTTTTGTACTGGGGTAATCCTAATC
TCCACATGTGTTCCGAACCCGTAA
Protein sequence:
MEGLYKINLIPNDLSVEETVLQIADTLDNLNGIVDDVFKRISNKIKINVEKTSKLQERIN
VSRTKVEKLAGTQKAIKVFSSAKYPSSITHEHYKSIFESNDYNYEPKNVIPTGKSNRQTN
EKAIQEKLHFFHVKVAEPKNNKTRNDFDLNTVLNSITSIGDLLIYKSDESPYFGSKTKGQ
TYVPKVNTTVDKGSLDEAPPSIVKKNLLKREIDEYMYAPGMGLVPELDMPLDLPHLPGIA
GDVQYSVTGDGSIAPSAVTSPVAITNPITESVLDLPDLQILPDLPVTSDTQYVPELVNPP
VKDVQDTLDAPKIRVEEPPALPSTPPPPPPPPPPPPPPPMEITQTPKRFKLIFCTGVILI
STCVPNP