| New model in OGS2.0 | DPOGS215065 |
|---|---|
| Genomic Position | scaffold2418:+ 18210-19577 |
| See gene structure | |
| CDS Length | 582 |
| Paired RNAseq reads | 47 |
| Single RNAseq reads | 197 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005544 (3e-94) |
| Best Drosophila hit | beta subunit of type II geranylgeranyl transferase (1e-56) |
| Best Human hit | geranylgeranyl transferase type-2 subunit beta (8e-70) |
| Best NR hit (blastp) | PREDICTED: similar to Rab geranylgeranyltransferase, beta subunit [Taeniopygia guttata] (1e-73) |
| Best NR hit (blastx) | PREDICTED: similar to Rab geranylgeranyltransferase, beta subunit [Taeniopygia guttata] (1e-72) |
| GeneOntology terms | GO:0005515 protein binding GO:0046872 metal ion binding GO:0016740 transferase activity GO:0004663 Rab geranylgeranyltransferase activity GO:0004659 prenyltransferase activity |
| InterPro families | IPR001330 Prenyltransferase/squalene oxidase IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid |
| Orthology group | MCL13357 |
Nucleotide sequence:
ATGTCGCAAAAAACAAAAGACGTCGTACTTTCTGAAGATCGGCCTAAGACTTTGTTATTA
CAAAAGCATTCAGACTATTTAGCCAGCTACGGTCTAAATAAGAACGATTATGAATATTGC
ATGACAGAATATTTAAGAATGTCCGGTATTTACTGGAGTCTCACGGCAATGGAACTTATG
AATCAGTCATCCAGGATGCCAAAGGACGAAATTATATCATTTATATCAACCTGTCAGGAT
AGTGAGAGTGGAGGTATATCGGCCTGCAACGGCCACGATCCACACATGTTATATACCCTG
AGCGCTGTTCAGGTGTTGGCTATGTATGACAGACTGGACGCTATAGATGTTGAAGGTGTG
GTGAAGTTTGTGAGTTCCCTCCAGCAAGAAGATGGAAGTTTCTTTGGTGACAAGTGGGGT
GAGGTGGACACCCGTTTCTCATTCTGTGCGGTGATGTGTCTGTCGTTGCTGCATCGTCTT
GATGCAATCGATGTTACTAAAACTGTCGAATTTGTAGTGAACTGTATGAACTTCGATGGT
GGCTTCGGTTCTAAACCGGGCTCGGAGAGCCACGCAGGTTAA
Protein sequence:
MSQKTKDVVLSEDRPKTLLLQKHSDYLASYGLNKNDYEYCMTEYLRMSGIYWSLTAMELM
NQSSRMPKDEIISFISTCQDSESGGISACNGHDPHMLYTLSAVQVLAMYDRLDAIDVEGV
VKFVSSLQQEDGSFFGDKWGEVDTRFSFCAVMCLSLLHRLDAIDVTKTVEFVVNCMNFDG
GFGSKPGSESHAG