| Genomic Position | scaffold5668:- 11592-12485 |
|---|---|
| See gene structure | |
| CDS Length | 894 |
| Paired RNAseq reads | 35 |
| Single RNAseq reads | 311 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-116) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-107) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGGCAGTCGCTCCATTAAAACCACTCCTCGCCACTCTTAAGAATGACAATGACAAAGAA
CTGGGTACGACTAGGGCATTGCCGTTAAAAGACGCGCAGGCACATCGCCCTACACCTGCG
ATAAGTGGGCAAGGGCTACCGTGTCAAGTACGGGCACCGCTAAAGACGTCAGTATCCCAA
CCGATCTCAGTAGGGGTTCACCAAGGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTG
CTGGACACTGTCTCGGCTAACATCCAGGATCAGCCTCCATGGCTGATGATGTATGCCGAT
GACATAGCGCTCATTGATGAGAGCAGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAG
GGTACGCTTGAGAACGGTGGTCTTAAACTAAATGTGACGAAGACCGAGTACATGGCTTGC
GGAAGCCCGGACTCTTGCACTATCCATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAG
TTCAGGTACCTTGGATCTATTCTACATGAGTCCGGAGGCATCGATCACGATGTCCAAGCC
CAGATCAGCGCTACTTGGGCGAAATGGCGTGAGGTCACAGGTGTGATCTGCGACCGCAGA
ATACCGAACAAGCTCAAGGCACTAATATACAAGAGCATAATCCGACCGGTTCTCTTATAT
GGCAGTGAATATTGGCCAGCACTGTCCAGGCACATTCAGGAGCTTCACGTCACTGCTATG
AAGATGCTGAGGTGGATGTGTGGCGTTACGCGAGCAGACCGCATACGTAATACATTTATC
AAAGGTGGTTTTGGAGTCCGTGACGTAGCGGATAAGCTTCAAGAGAGTTCAAAAATTTGT
CTTGATATGTCTGTCCCTGGAGCAAGGCCCCCAGGACGCCCAAGAAAGCGATGA
Protein sequence:
MAVAPLKPLLATLKNDNDKELGTTRALPLKDAQAHRPTPAISGQGLPCQVRAPLKTSVSQ
PISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWK
GTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQA
QISATWAKWREVTGVICDRRIPNKLKALIYKSIIRPVLLYGSEYWPALSRHIQELHVTAM
KMLRWMCGVTRADRIRNTFIKGGFGVRDVADKLQESSKICLDMSVPGARPPGRPRKR