Genomic Position | scaffold5668:- 11592-12485 |
---|---|
See gene structure | |
CDS Length | 894 |
Paired RNAseq reads   | 35 |
Single RNAseq reads   | 311 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-116) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-107) |
GeneOntology terms    | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGGCAGTCGCTCCATTAAAACCACTCCTCGCCACTCTTAAGAATGACAATGACAAAGAA
CTGGGTACGACTAGGGCATTGCCGTTAAAAGACGCGCAGGCACATCGCCCTACACCTGCG
ATAAGTGGGCAAGGGCTACCGTGTCAAGTACGGGCACCGCTAAAGACGTCAGTATCCCAA
CCGATCTCAGTAGGGGTTCACCAAGGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTG
CTGGACACTGTCTCGGCTAACATCCAGGATCAGCCTCCATGGCTGATGATGTATGCCGAT
GACATAGCGCTCATTGATGAGAGCAGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAG
GGTACGCTTGAGAACGGTGGTCTTAAACTAAATGTGACGAAGACCGAGTACATGGCTTGC
GGAAGCCCGGACTCTTGCACTATCCATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAG
TTCAGGTACCTTGGATCTATTCTACATGAGTCCGGAGGCATCGATCACGATGTCCAAGCC
CAGATCAGCGCTACTTGGGCGAAATGGCGTGAGGTCACAGGTGTGATCTGCGACCGCAGA
ATACCGAACAAGCTCAAGGCACTAATATACAAGAGCATAATCCGACCGGTTCTCTTATAT
GGCAGTGAATATTGGCCAGCACTGTCCAGGCACATTCAGGAGCTTCACGTCACTGCTATG
AAGATGCTGAGGTGGATGTGTGGCGTTACGCGAGCAGACCGCATACGTAATACATTTATC
AAAGGTGGTTTTGGAGTCCGTGACGTAGCGGATAAGCTTCAAGAGAGTTCAAAAATTTGT
CTTGATATGTCTGTCCCTGGAGCAAGGCCCCCAGGACGCCCAAGAAAGCGATGA
Protein sequence:
MAVAPLKPLLATLKNDNDKELGTTRALPLKDAQAHRPTPAISGQGLPCQVRAPLKTSVSQ
PISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWK
GTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQA
QISATWAKWREVTGVICDRRIPNKLKALIYKSIIRPVLLYGSEYWPALSRHIQELHVTAM
KMLRWMCGVTRADRIRNTFIKGGFGVRDVADKLQESSKICLDMSVPGARPPGRPRKR