New model in OGS2.0 | DPOGS210564  |
---|---|
Genomic Position | scaffold18247:- 557-5554 |
See gene structure | |
CDS Length | 1182 |
Paired RNAseq reads   | 1234 |
Single RNAseq reads   | 3068 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009941 (2e-32) |
Best Drosophila hit   | CG12082 (3e-94) |
Best Human hit | ubiquitin carboxyl-terminal hydrolase 5 isoform 2 (1e-87) |
Best NR hit (blastp)   | ubiquitin carboxyl-terminal hydrolase 5 [Culex quinquefasciatus] (4e-115) |
Best NR hit (blastx)   | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] (2e-107) |
GeneOntology terms    | GO:0016579 protein deubiquitination GO:0004221 ubiquitin thiolesterase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0008270 zinc ion binding |
InterPro families    | IPR001607 Zinc finger, UBP-type IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site IPR013083 Zinc finger, RING/FYVE/PHD-type |
Orthology group | MCL11167 |
Nucleotide sequence:
ATGTCGGAAATCCCGGAGCCAGAACAAACAGGAGATGGTCCAGAGAAGAAAATAACTCGC
CTGGCGATCGGTGTGGAGGGTGGCTTCGACCCTGACTGTGGCAAACCAAAGTACACTTAC
ACAGAACACTACAGCGTTGTGGTGCTGCCGGGGTTTCACACATTCCCCTGGCCTAATGAC
GCTTTACCTGACGTGGTAAAGAAATCTGTTCAGGCTGTGCTAGATGCGGATTCTCCATTC
AAGCTCGCTGAGGCGGAGGCTTTACACGGCACCTGGGATGGGGAGAAGCGAGAAGTATCC
GTCCACTCGGTTAACTTGAAGCAGTTAGATAACGGCGTTAAAATACCACCTTCCGGCTGG
AAATGTGCCAAGTGTGATCTGACGAACAACTTGTGGTTGAATCTGACCGACGGGTCCATA
TTGTGTGGGAGGAGATTCTTCGATGGCTCCGGCGGAAACGATCACGCGGTGGAGCATTTC
CGCGCGACCGGATATCCGCTCGCTGTGAAGCTTGGCACGATAACAGCTGACGGTACTGGC
GACGTGTACTCGTACGCCGAAGACGATATGGTCGAGGACCCCTACCTGGCGGAACACCTC
AAACACTTCGGCATCAACGTCCAGCAGTTACAGAAGACGGAGAAGTCGATGGTGGAGTTG
GAGCTGGAACTGAACCGCCGTACGGGCGAGTGGAACACCATCCAGGAGTCTGGAAGTGAG
CTGCGACCGCTGCACGGACCAGCACTCACAGGTGTCAACAACCTCGGCAACTCCTGTTAC
ATCAATAGTGTGGTCCAGGTGCTCTTCCGTATGCCGGACTTCATACGTCGCTACGTGGAA
GGCGCGCCAGAGATATTCTCGACCTTCCCCGAGGATCCTGCTAACGATTTCAACGTGCAG
ACAGATCCGTCCGAAGTGGTCCGTCCCCTGATACCGTTTCAAGCGTGTTTAGACGCGTTC
ATGAAGGAGGAACTCATTGAACAGTTCTTTAGTTCAGCTCTCAATAAGAAAGTTACTGCT
CGCAAAATAACCCGGCTGGCGACTTTCCCCGATTACCTTTGGATCCAGTTAAAGAAATTC
ACTATCAAAGAAGATTGGACACCCGCCAAGCTAGATGTGGCCGTGGACATGCCGTGGGAG
GTCGGTGTCATTGTCATCGTCCCAAAACAAACGTTTTTTTAA
Protein sequence:
MSEIPEPEQTGDGPEKKITRLAIGVEGGFDPDCGKPKYTYTEHYSVVVLPGFHTFPWPND
ALPDVVKKSVQAVLDADSPFKLAEAEALHGTWDGEKREVSVHSVNLKQLDNGVKIPPSGW
KCAKCDLTNNLWLNLTDGSILCGRRFFDGSGGNDHAVEHFRATGYPLAVKLGTITADGTG
DVYSYAEDDMVEDPYLAEHLKHFGINVQQLQKTEKSMVELELELNRRTGEWNTIQESGSE
LRPLHGPALTGVNNLGNSCYINSVVQVLFRMPDFIRRYVEGAPEIFSTFPEDPANDFNVQ
TDPSEVVRPLIPFQACLDAFMKEELIEQFFSSALNKKVTARKITRLATFPDYLWIQLKKF
TIKEDWTPAKLDVAVDMPWEVGVIVIVPKQTFF