| New model in OGS2.0 | DPOGS210878 |
|---|---|
| Genomic Position | scaffold1688:+ 17359-21577 |
| See gene structure | |
| CDS Length | 852 |
| Paired RNAseq reads | 715 |
| Single RNAseq reads | 1825 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007003 (3e-116) |
| Best Drosophila hit | CHIP (4e-114) |
| Best Human hit | E3 ubiquitin-protein ligase CHIP (3e-87) |
| Best NR hit (blastp) | STIP1 homology and u box-containing protein, putative [Pediculus humanus corporis] (3e-128) |
| Best NR hit (blastx) | STIP1 homology and u box-containing protein, putative [Pediculus humanus corporis] (3e-126) |
| GeneOntology terms | GO:0005488 binding GO:0016567 protein ubiquitination GO:0000151 ubiquitin ligase complex GO:0004842 ubiquitin-protein ligase activity GO:0030018 Z disc |
| InterPro families | IPR019734 Tetratricopeptide repeat IPR003613 U box domain IPR013026 Tetratricopeptide repeat-containing IPR011990 Tetratricopeptide-like helical IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL13769 |
Nucleotide sequence:
ATGTATTCCACCGCTAACTTGACCGATAAAGAATTGAAAGAACAAGGAAACAGGTTGTTT
AGTTTGAGAAGATTCGAAGATGCTATGAACTGTTACACGAAGGCTATCATAAAAAATCCA
TCTGTAGCCACATACTTTACAAATAGAGCGTTATGTCACCTCAAGATGAAGAGATGGGAA
GCTACTTGTCAGGATTGCCGAAGAGCCCTGGATATAGACAACAACCAGGTGAAAGGTCAT
TTCTTTCTTGGCCAGGCCTTGGTTGAGTTGGACTGCTATGATGAAGCTATCAAACACTTA
CATAGAGCCAATGATCTAGCAAGAGATCAAAAGCTGAATTTCGGCGATGACATAGCAGCT
CAGATAAGAATTGCAAGGAAGAAGAGATGGAATGTACAGGAGGAGAAGAGAATATCACAG
GAGATTGAACTGCAGACTTATTTAAATAGGCTTATAAATGAGGACATGCAACGTAGAGTA
GAATCAATTAAAATAGAAAACATTAATGAAGAAGACACCAATAGCAAAATAGCTAAAGTG
GAAGAAGAATGCAACAACTATAGCAGTGAACTTAACAATCTATTTTCAAAAATGGATGAA
CGGAGGAGGAAACGCGATGTACCAGACTATCTATGCGGCAAAATAAGCTTCGAGATTCTG
AACGAGCCTGTCATCACGCCTAGCGGGATAACCTATGAGAAGAAAGACATTGAGGAGCAT
CTCGAGCGCGTCGGCCATTTCGATCCTGTGACACGTGTGAAGTTAACAGCGGATCAACTC
ATACCTAACTTCACTATGAAGGAGGTTGTGGACGCCTTCCTCCAGGACAACGAGTGGGCG
CTCGATTATTAA
Protein sequence:
MYSTANLTDKELKEQGNRLFSLRRFEDAMNCYTKAIIKNPSVATYFTNRALCHLKMKRWE
ATCQDCRRALDIDNNQVKGHFFLGQALVELDCYDEAIKHLHRANDLARDQKLNFGDDIAA
QIRIARKKRWNVQEEKRISQEIELQTYLNRLINEDMQRRVESIKIENINEEDTNSKIAKV
EEECNNYSSELNNLFSKMDERRRKRDVPDYLCGKISFEILNEPVITPSGITYEKKDIEEH
LERVGHFDPVTRVKLTADQLIPNFTMKEVVDAFLQDNEWALDY