New model in OGS2.0 | DPOGS202371  |
---|---|
Genomic Position | scaffold7098:- 940-4259 |
See gene structure | |
CDS Length | 1032 |
Paired RNAseq reads   | 624 |
Single RNAseq reads   | 1570 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013791 (1e-89) |
Best Drosophila hit   | Nup62 (5e-50) |
Best Human hit | nuclear pore glycoprotein p62 (6e-46) |
Best NR hit (blastp)   | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (7e-64) |
Best NR hit (blastx)   | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (5e-61) |
GeneOntology terms    | GO:0005643 nuclear pore GO:0017056 structural constituent of nuclear pore GO:0006911 phagocytosis, engulfment |
InterPro families   | IPR007758 Nucleoporin, Nsp1-like, C-terminal |
Orthology group | MCL12333 |
Nucleotide sequence:
ATGTTTGGCCAATCACAGCCATCACAGACGCCAAGTTTCGGCCAATCCGGCCAGACCTCT
ACATCACAGACAACTCAAGCCATAAGCTTCAGTACAAGTCTTTCTACGGCACAAACCACT
AGTGCATCGGGACTATCGACTAGCGGGTTAGGAATATCGACCAGTGGTTTCGGGCTCACA
ACTAGTGGGACGGGAATCTCGACGAGCGGTTTGGGAATATCATCGAGTTTAGGAGTGTCG
ACTGCAACAGCGGGAATCACTACTAGCAGCTTGGGGATATCCACAAGCGCTCTGGGAACC
ACTACCACGAGTGGTATATCTCTCGCCGGTGGCTTATCATTCGCCAAGACAACAACAGCA
ACTTCAACGACCCCGTCCGGTATAACAGCGTTGGGTAAAACGGCTGCAAGTGTGATGCCT
CCTACTACAGTATCCCAAGCCCCTCCAGCGGCTATAACTTCAATAAATTTCGCGGAACTC
CAGGAAAATATCAATAAGTGGAGTTTGTCTTTGGAGGAACAGGAGAGAGTTTTCTACAGA
CAAGCGACTACACTCAACGCCTGGGACAGACTATCGGCGAGTAACGGTGAAAAGATCTTA
GAGCTGAACGAGGCTATAGAGACACTCAAGAACGAGCAACAGAGTTTGGAACACGAACTG
GACTTTGTTCTAGCACAACAGAAGGAGCTAGAAGATATACTCACACCGTTAGAGAAGAAT
ATAGTGGATGAAAGAGTTAGAGATCCGGAGAGAGAACATATGTATTCATTAGCGGAGACT
TTGGATACACAGTTACGGCAAATGTCTGAGGATCTGAAAGAAGTCATCGAACATCTCAAT
GAGACCAATAGAAATCCAGACAATAATGATCCAATCGTCCAGATCGGTCGGATCCTCAAC
GCTCACATGTCGTCCATGCAGTGGATCGACAGCTCCATAGCTCAGATAACGACCAAGCTG
GACGGGCTCCGGGCGACACACGACGCGCTCAGGAAAGACAACCAGAGGTCATTCCAGCTA
ACATATAATTAA
Protein sequence:
MFGQSQPSQTPSFGQSGQTSTSQTTQAISFSTSLSTAQTTSASGLSTSGLGISTSGFGLT
TSGTGISTSGLGISSSLGVSTATAGITTSSLGISTSALGTTTTSGISLAGGLSFAKTTTA
TSTTPSGITALGKTAASVMPPTTVSQAPPAAITSINFAELQENINKWSLSLEEQERVFYR
QATTLNAWDRLSASNGEKILELNEAIETLKNEQQSLEHELDFVLAQQKELEDILTPLEKN
IVDERVRDPEREHMYSLAETLDTQLRQMSEDLKEVIEHLNETNRNPDNNDPIVQIGRILN
AHMSSMQWIDSSIAQITTKLDGLRATHDALRKDNQRSFQLTYN