| New model in OGS2.0 | DPOGS210174 |
|---|---|
| Genomic Position | scaffold1224:- 12647-21256 |
| See gene structure | |
| CDS Length | 2478 |
| Paired RNAseq reads | 1535 |
| Single RNAseq reads | 3527 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014143 (2e-24) |
| Best Drosophila hit | CG9143 (4e-119) |
| Best Human hit | ATP-dependent RNA helicase DDX24 (3e-87) |
| Best NR hit (blastp) | PREDICTED: similar to CG9143-PA [Nasonia vitripennis] (3e-140) |
| Best NR hit (blastx) | PREDICTED: similar to CG9143-PA [Nasonia vitripennis] (5e-134) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0004004 ATP-dependent RNA helicase activity GO:0005524 ATP binding |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR014014 RNA helicase, DEAD-box type, Q motif IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
| Orthology group | MCL13615 |
Nucleotide sequence:
ATGTCCAAAAAGATTCAAACCAAAAAATGGGACTTAGTACCATTAGATGGGTTCCCTATC
ACAATGATGGACAAGGGGTTTGTTGGACTTGAAGAATGTACAGACTACGGCCTGGATAAA
CAAAACAGAAGGTCTAAAAAGAATAAACAACCAAAAAAGAGGAAGCCAACAGAGAACAAA
GTAAAAGATAAAGCTGTAGAGGTTCCTCAGAAGAAAATTAAACTTAGCAATGGTTTTATG
GTTGAAACATGTAAAAAAGTCACACCATCAAAAGCAAATGATGTCCAAGAAAACAATGAA
CAGGCAAAAGAGAGAACCAAAAAGGTTAAGGTAGCACAAGTAAAGGCCAATAAAGTTAAG
AAACCGAAACTCGGTGAAAATATAGCTAAAGTTACAAATCTGACTAAAGAAGACATGTTG
TCCTGGGCGGAGTTTAAACTGCCAGAGGAGATTGTTAGGGCGCTTATGGAGCAGGGATTT
AAAAATCCGACAAAAATACAACAGTTGGTACTCCCTGCTGCGATTCACGGTAGAAGAGAT
ATCCTCGGAGCTGCTGAGACGGGCAGTGGTAAGACATTAGCCTTCGGACTTCCAATTTTA
ACTGGCATAATGAAACTGAAAGAGAAAGCTGAGCAGAAAGGTCTAGATGTGTATGATATA
CCTTTTAAGAAAACGTCAGTTAAAAAGAGAAAAGATGTCGAAAATAAAAAAGAAAAGATT
AATGGTAAAGATAGAAGGAATAATCATAAAAATAATGAAAAGAAAGTAGAGAGTGAGAAT
GTAAAGGAGTCGTCGGAGGATGGTTATAGCAGTGGCGATGGAAATGAATCATTGAGTGGA
GGTGATGTTGATGAAGAAAATAATGATAGTGACTTCATAGAAGAAATAGAAGTTCCCTTG
AGGAAACCAAAGGAATCAGAGGAAGATGATTTAAGTGATGAAGATTATGTACATTTGTCT
GATATGTTGGAGTCTGATGATTTAGAGAGCGATGAAAATGATGAAGATGAGGTTAGTGAT
GGCGAAGATTACGATGAAAATGATGATGATGAAGATGATGAACAAAATAACGATGTAAGT
GACGATGAAGAGAACAGTGGCATTGATGAAGTAGACATTGCAAATGGAGGTAGAGGCTGC
GTGAAGGTGATAGAAGATGTATCATTGCCGGAACAAGTTATGATGAAGACTGGCAAACCT
TTGTATGCTCTGATATTAACACCAACGAGAGAATTGGCCATACAGATCAGTAGACATCTC
ATAGCTGCTGCTAAGTATACAGGCATAAAGATAGCGACGGTGGTGGGTGGCATGGCGGCC
GTTAAACAGGAGCGTGTGCTGTCATCAGGTCCGGAGGTGGTGGTGGCGACTCCTGGCCGG
TTGTGGCAACTGTTGACCGAGGGTCAGAGCCATCTCATGCAGATACCTTCCGTCAAGTTT
CTGGCCATCGATGAAACTGATCGTATGATAGAACGCGGTCACTTTGAAGAACTGCAGCCA
TTGTTGGAGAGGCTCAACTCAGAGGAAACTCACAAAAACTCAAGACAGAACTTCGTTTTC
TCAGCCACACTCACAATGGTCCACGACTTACCCTCGCATATGAAGGGCAAAAAGGTAACG
AAGAGAGGGAAAGTGCTGAATAGAAAAATTGACAAAATGACACCGCAGCAGAAGATAAAG
AGACTGGTTGATATGATAGGGATGTCGGACCCCAAGGTCGTTGATATCACCACACAGAAC
TTAGGTGCCGCGGATACGTTGACCGAATGCCGCATAACGTGCTCGTTAGACCAGAAGGAC
GTGTTCTTGTACTATATACTGAAGAGACATCCGGGGAGGACTATCGTTTTCTGTAATTCA
ATCAGCAGCGTAAAAAGGCTGGCCCAAATACTAGCGTTGGTGAAGTGTAACCCCCTTCCG
CTGCACGCGAGCATGCCACAACGACAACGTTTGAAGAATTTAGAAAGATTCCGTGACGAT
GTCCACGGCGTGTTGGTGTCTACTGACGTAGCTGCCCGCGGGTTGGACATACCTGATGTA
GATCACGTGATACATTACCAGGTCCCGAGGACGGCTGAGAACTACATACACCGCAGTGGA
AGAACAGCCCGCGCTTCCAAGGAAGGCCTGACGATACTCATGATGGAACCCGCTGAGGCC
TACACTTACTCTAAGTTATGCCGGACCCTCAATAAGAGTAATATCAGTCCGGAGTTTAAA
TCCGACCCGTCAATTGACAAAGCTCTTAAAACTAAGAGGAAACAGCTGGAATCGATACTG
GCAAGACCTCTGTTCCCAAAAGGATTTTCATACAAGTACCCCACTCTAAACGATCCAAAC
GCATTACAGGTCACGTCTGATGAAAAGGCTTTGGAGGTTATGAAAAAGGCAATACAGAGC
GGCGAACTCAAAAGGGAAAAGCGGAAAGGGAAAAACGCGCCATTGCTGAAATTAGAGAAG
CTTTTTAGAAATAAATAA
Protein sequence:
MSKKIQTKKWDLVPLDGFPITMMDKGFVGLEECTDYGLDKQNRRSKKNKQPKKRKPTENK
VKDKAVEVPQKKIKLSNGFMVETCKKVTPSKANDVQENNEQAKERTKKVKVAQVKANKVK
KPKLGENIAKVTNLTKEDMLSWAEFKLPEEIVRALMEQGFKNPTKIQQLVLPAAIHGRRD
ILGAAETGSGKTLAFGLPILTGIMKLKEKAEQKGLDVYDIPFKKTSVKKRKDVENKKEKI
NGKDRRNNHKNNEKKVESENVKESSEDGYSSGDGNESLSGGDVDEENNDSDFIEEIEVPL
RKPKESEEDDLSDEDYVHLSDMLESDDLESDENDEDEVSDGEDYDENDDDEDDEQNNDVS
DDEENSGIDEVDIANGGRGCVKVIEDVSLPEQVMMKTGKPLYALILTPTRELAIQISRHL
IAAAKYTGIKIATVVGGMAAVKQERVLSSGPEVVVATPGRLWQLLTEGQSHLMQIPSVKF
LAIDETDRMIERGHFEELQPLLERLNSEETHKNSRQNFVFSATLTMVHDLPSHMKGKKVT
KRGKVLNRKIDKMTPQQKIKRLVDMIGMSDPKVVDITTQNLGAADTLTECRITCSLDQKD
VFLYYILKRHPGRTIVFCNSISSVKRLAQILALVKCNPLPLHASMPQRQRLKNLERFRDD
VHGVLVSTDVAARGLDIPDVDHVIHYQVPRTAENYIHRSGRTARASKEGLTILMMEPAEA
YTYSKLCRTLNKSNISPEFKSDPSIDKALKTKRKQLESILARPLFPKGFSYKYPTLNDPN
ALQVTSDEKALEVMKKAIQSGELKREKRKGKNAPLLKLEKLFRNK