| New model in OGS2.0 | DPOGS213837 |
|---|---|
| Genomic Position | scaffold104:+ 40730-50150 |
| See gene structure | |
| CDS Length | 2766 |
| Paired RNAseq reads | 285 |
| Single RNAseq reads | 735 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011590 (0.0) |
| Best Drosophila hit | ionotropic receptor 25a (0.0) |
| Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 1 precursor (6e-60) |
| Best NR hit (blastp) | PREDICTED: similar to GA13857-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to GA13857-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane GO:0006811 ion transport GO:0004970 ionotropic glutamate receptor activity GO:0005929 cilium |
| InterPro families | IPR001320 Ionotropic glutamate receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001508 NMDA receptor |
| Orthology group | MCL16503 |
Nucleotide sequence:
ATGATCTTACTGAATGTCCTTCTTATATATTTCTTCAGAATAATCCTTTCTCAAACGACA
CAGAATATTAATGTCTTGTTGATAAACGAAGAAAATAACGCACTGGCTGAAAGATCATTT
GAAGTAGCCAAAGAGTATGTAAGGCGGAATCCTGGTTTGGGTCTAGCGGTTAATCCAGTG
ATCGTTGTTGGAAACCGTAGTGATGCTAAAGTTTTTCTTGAGAACGTTTGCAGAAAATAC
AATGATATGATTTCTGCGAAGAAAACGCCTCATGTCGTGTTGGATTTCACGATGACTGGC
GTCGGTTCGGAAACTATAAAGTCATTTACCGCAGCTTTGGCTTTGCCAACTATTTCTGGT
TCCTTTGGTCAACCGGGTGACTTACGACAATGGCGTGCCCTCGTTGATAACCAAACTAAA
TATCTGTTACAAGTCATGCCTCCAGCAGACATCCTGCCTGAAGCCGTACGGGCGATCGTT
ATGAAACAAGATATTACAAATGCTGCTATAATTTTTGATGAATATTTCGTTATGGATCAC
AAATATAAATCGCTTCTGCAGAATATTCCGACACGTCATGTTATTACTCCCGTTAAGAGT
TTTAGCAAGGATGACATAAAAACTCAGCTAAGAAGCTTACGAGAGCTGGACATAGTGAAT
TTTTTTATCGTCGGCAGTTTAAGGACTATAAAAAATGTATTAGATGCCGCGAATGAAAAC
CAGTACTTTGGCCGAAAGACGGCCTGGTTTGCTTTATCTTTAGATAAAGGGGAAATAAGC
TGCGGCTGCAAAGACGCGACAATAGTTCACATAAAACCCACACCGGATGCCAACAGTCGA
GATCGATTAGGAAAAATTAAAACGACGTACAGCATGAACGGGGAGCCTGAAATCACTTCC
GCGTTTTATTTCGACCTGTCATTGAGAACTTTTTTATCTATAAAGTCATTGCTGGACTCT
GGCAAATGGCAAAATGATATGAATTTTATTACCTGTGATGATTACGATGGCAAGAATACA
CCTAACAGGAGCTTAGATCTCAAAACTGCTTTTCAAGAGGTGAAGGAAACGCCAACATAT
GCTTCATTTTATATACCCGAGGACGATCCAATGAACGGAAGAAGTTATATGGAATTTTCC
ACTGATTTAACGGCCGTCACCATTAAAGATGGGGCATCTATAGGAAGTAAGACTCTGGGG
TCGTGGAAGGCTGGCTTATCCAGTCCCCTATTACTAACTGATCCTGATAATATGAGCGAC
TATTCCGCTCAACTGGTATATAGAATAGTCACCGTCGAGCAACAACCTTTCATTATTAGA
GACGAAGAAGCGCCGAAGGGTTTTAAAGGTTATTGCATTGATCTTATCGAGGAAATTCGA
CAGATTGTTAAATTTGATTATGAAATAACGCTAGCACCGGATGGAAGCTTCGGTGTAATG
GATGAGAATGGTAACTGGAATGGAATTATAAAGGAATTGATGGAAAAAAGGGCAGATATA
GGTTTAACGTCATTATCTGTAATGGCGGAAAGGGAGAATGTAGTCGATTTTACTGTACCT
TATTACGATTTGGTGGGAATAACAATTTTAATGAAATTGCCAAGAACTCCTACGTCACTG
TTCAAATTCTTGACAGTTTTAGAAAATGATGTTTGGTTGTCTATTTTGGCTGCATACTTT
TTTACGAGTTTTCTCATGTGGGTATTTGATAAATGGAGTCCATACAGTTACCAGAACAAT
AGGGAAAAGTACAAGGATGACGAGGAGAAAAGGGAATTCACTCTTAAAGAGTGTCTATGG
TTTTGCATGACGTCATTAACACCCCAAGGTGGAGGGGAGGCTCCGAAGAATCTCTCCGGT
CGTCTGCTAGCTGCAACTTGGTGGCTTTTCGGATTCATAATCATCGCGTCGTATACTGCA
AACTTGGCAGCATTTTTGACAGTATCCCGTTTAGATACTCCGATAGAGTCCTTGGACGAT
TTATCCAAACAGTACAAAATACAGTACGCGCCATTGAATGGTTCAGCTGCTATGACTTAT
TTTGAAAGGATGGCTAACATAGAAGTTCGTTTCTATGAGATATGGAAAGAAATGAGTCTG
AATGACAGTCTGAGTGACGTGGAACGTGCGAAATTAGCCGTTTGGGATTATCCTGTCAGC
GATAAATATAGCAAAATGTGGCAAGCTATGAAGGAGGCAGGCTTACCGAACTCTATAGAG
GAAGCCGTTGACAGAGTCAGGGCTTCGAAAAGTTCCAGTGAAGGCTTCGCGTGGTTGGGA
GACGCAACTGACATTAGATATCATGTTCTGACCAGTTGTGATCTGCAAATGGTTGGTGAT
GAGTTCTCAAGGAAACCTTATGCCATTGCCGTCCAACAGGGGTCACCACTGAAAGATCAG
TTTAATAATGCGATACTGCAGCTCCTTAATAAGAGGAAGTTGGAGAAATTGAAAGAAGAT
TGGTGGAATAATAATCCTAATGCGATCAAATGCGAGAAGCAGGACGATCAATCTGACGGG
ATCTCGATACAGAATATTGGCGGCGTTTTTATTGTGATATTTATGGGTATTGGCCTTGCT
TGTGTTACTTTGGGGGTGGAATATTGGTGGTACAAATGGAGACGGCGCCCTACCATTAGT
GGCGTTAAACAGGTAGAACCAGCTAAATCTGTTAGAAACAACACAGAGTCGAATACGAAG
ATCAACGACGGATTCACTTTCCGAGCGAGGAATTTGGGTCTCGCGAATTTGAAACAAAAA
TTTTAA
Protein sequence:
MILLNVLLIYFFRIILSQTTQNINVLLINEENNALAERSFEVAKEYVRRNPGLGLAVNPV
IVVGNRSDAKVFLENVCRKYNDMISAKKTPHVVLDFTMTGVGSETIKSFTAALALPTISG
SFGQPGDLRQWRALVDNQTKYLLQVMPPADILPEAVRAIVMKQDITNAAIIFDEYFVMDH
KYKSLLQNIPTRHVITPVKSFSKDDIKTQLRSLRELDIVNFFIVGSLRTIKNVLDAANEN
QYFGRKTAWFALSLDKGEISCGCKDATIVHIKPTPDANSRDRLGKIKTTYSMNGEPEITS
AFYFDLSLRTFLSIKSLLDSGKWQNDMNFITCDDYDGKNTPNRSLDLKTAFQEVKETPTY
ASFYIPEDDPMNGRSYMEFSTDLTAVTIKDGASIGSKTLGSWKAGLSSPLLLTDPDNMSD
YSAQLVYRIVTVEQQPFIIRDEEAPKGFKGYCIDLIEEIRQIVKFDYEITLAPDGSFGVM
DENGNWNGIIKELMEKRADIGLTSLSVMAERENVVDFTVPYYDLVGITILMKLPRTPTSL
FKFLTVLENDVWLSILAAYFFTSFLMWVFDKWSPYSYQNNREKYKDDEEKREFTLKECLW
FCMTSLTPQGGGEAPKNLSGRLLAATWWLFGFIIIASYTANLAAFLTVSRLDTPIESLDD
LSKQYKIQYAPLNGSAAMTYFERMANIEVRFYEIWKEMSLNDSLSDVERAKLAVWDYPVS
DKYSKMWQAMKEAGLPNSIEEAVDRVRASKSSSEGFAWLGDATDIRYHVLTSCDLQMVGD
EFSRKPYAIAVQQGSPLKDQFNNAILQLLNKRKLEKLKEDWWNNNPNAIKCEKQDDQSDG
ISIQNIGGVFIVIFMGIGLACVTLGVEYWWYKWRRRPTISGVKQVEPAKSVRNNTESNTK
INDGFTFRARNLGLANLKQKF