New model in OGS2.0 | DPOGS213838  |
---|---|
Genomic Position | scaffold104:+ 119855-120855 |
See gene structure | |
CDS Length | 585 |
Paired RNAseq reads   | 99 |
Single RNAseq reads   | 335 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011592 (6e-72) |
Best Drosophila hit   | CG10214 (8e-53) |
Best Human hit | oligoribonuclease, mitochondrial precursor (4e-59) |
Best NR hit (blastp)   | oligoribonuclease, mitochondrial [Danio rerio] (1e-63) |
Best NR hit (blastx)   | oligoribonuclease, mitochondrial [Danio rerio] (2e-61) |
GeneOntology terms    | GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0004527 exonuclease activity |
InterPro families    | IPR006055 Exonuclease IPR013520 Exonuclease, RNase T/DNA polymerase III IPR022894 Oligoribonuclease IPR012337 Ribonuclease H-like |
Orthology group | MCL11769 |
Nucleotide sequence:
ATGAAATCTAACGTCCCAAAAACTTCTACGAGTGAAGCTAAACGTATAGTTTGGATCGAT
TTAGAAATGACCGGTCTCAATGTTGAAAAAGACCATATTCTTGAGATAGCTTGCCTTGTA
ACAGATGAACACTTAAATATTGTCAGCACAGGACCTAATATAATCATACATCAGGATGAT
GAAGTATTGAATAATATGAATCAATGGTGTGTTACTCAACATGGTGAGAGTGGATTGACG
GAGGCTTGTCGAAAATCTCAAATAACATTAACCAAAGCAGAAAATGACATTTTAAATTTT
GTCAAATCTCATGTACCTGAGAAATTGTGCCCTTTAGGAGGAAATAGTGTTTATATGGAC
AGACTATTCTTACAAAAATATATGCCCAAATTAAACAACTATTTGCACTATAGAATTATT
GATGTGAGTACCATAAAGGAGTTAGCTAAGAGGTGGTTCCCGAAAGAGTATTCGAGGATA
CCGACAAAGAAGTTTGAACATAGATGTTTGAATGATATCAAAGAAAGCGTTGAGGAACTT
AAGTATTATAGAAATAATATATTTAAGGTTAATGAACCATTATAA
Protein sequence:
MKSNVPKTSTSEAKRIVWIDLEMTGLNVEKDHILEIACLVTDEHLNIVSTGPNIIIHQDD
EVLNNMNQWCVTQHGESGLTEACRKSQITLTKAENDILNFVKSHVPEKLCPLGGNSVYMD
RLFLQKYMPKLNNYLHYRIIDVSTIKELAKRWFPKEYSRIPTKKFEHRCLNDIKESVEEL
KYYRNNIFKVNEPL