| New model in OGS2.0 | DPOGS213839 |
|---|---|
| Genomic Position | scaffold104:+ 137771-138538 |
| See gene structure | |
| CDS Length | 543 |
| Paired RNAseq reads | 923 |
| Single RNAseq reads | 5242 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011593 (4e-71) |
| Best Drosophila hit | succinate dehydrogenase C (3e-32) |
| Best Human hit | succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 1 precursor (2e-20) |
| Best NR hit (blastp) | AGAP010672-PA [Anopheles gambiae str. PEST] (1e-38) |
| Best NR hit (blastx) | mitochondrial succinate dehydrogenase cytochrome b subunit [Culex quinquefasciatus] (5e-36) |
| GeneOntology terms | GO:0006105 succinate metabolic process GO:0006121 mitochondrial electron transport, succinate to ubiquinone GO:0000104 succinate dehydrogenase activity GO:0005749 mitochondrial respiratory chain complex II GO:0006099 tricarboxylic acid cycle GO:0008177 succinate dehydrogenase (ubiquinone) activity GO:0009055 electron carrier activity GO:0006979 response to oxidative stress GO:0008340 determination of adult lifespan |
| InterPro families | IPR014314 Succinate dehydrogenase, cytochrome b556 subunit IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site IPR014361 Succinate dehydrogenase, cytochrome b560 subunit |
| Orthology group | MCL12286 |
Nucleotide sequence:
ATGGCATTCTATTGCTGTAGCAGACTAGGAACGAAATCGGTGTTTGGAAACTTGGCAAAG
TATAGATCTGCTTTGGGCACAGTATCATATGCTCAATCTGCTGCAGTTCCCAAGATAACC
TTCAAAAATTTCGAACCACCAAAGGAAGAACATCATGACATTAAGAACGAACGCCTCAAA
AGACCTCTTTCACCTCACCTTACCATAATCGAGTATCAGCTGACAAGCATTTTATCAATT
TCCCATAGATTTGCGGGAATGATTCTGTCTGGATATGCTACAGCTTTAGGTGTTGGGGCC
TTAGTGTTGCCGAATGATATTTCTCACTATATAACTATGATTGAGGGACTCAATTTGTCC
CCGGCCACATTGTTTATTGCTAAAGTATTGATAGCAGCTCCATTTGGTTATCATTTTGCT
AACGGAATTCGGCATCTGTACTGGGATACCGCTAAAGGTTTGTCTATTAAAGAAGTTTAT
TCAACCGGATACACGATGTTGGCCGGAGCAGCGGTACTTACATTGATTTTAGCTGCGTTG
TAA
Protein sequence:
MAFYCCSRLGTKSVFGNLAKYRSALGTVSYAQSAAVPKITFKNFEPPKEEHHDIKNERLK
RPLSPHLTIIEYQLTSILSISHRFAGMILSGYATALGVGALVLPNDISHYITMIEGLNLS
PATLFIAKVLIAAPFGYHFANGIRHLYWDTAKGLSIKEVYSTGYTMLAGAAVLTLILAAL