New model in OGS2.0 | DPOGS206272  |
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Genomic Position | scaffold6134:- 4904-5443 |
See gene structure | |
CDS Length | 540 |
Paired RNAseq reads   | 20 |
Single RNAseq reads   | 235 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010749 (5e-29) |
Best Drosophila hit   | empty spiracles (2e-08) |
Best Human hit | ND |
Best NR hit (blastp)   | empty spiracles [Tribolium castaneum] (2e-21) |
Best NR hit (blastx)   | empty spiracles [Tribolium castaneum] (8e-07) |
GeneOntology terms    | GO:0001700 embryonic development via the syncytial blastoderm GO:0035284 brain segmentation GO:0003704 specific RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0005634 nucleus GO:0035277 spiracle morphogenesis, open tracheal system GO:0042305 specification of segmental identity, mandibular segment GO:0007383 specification of segmental identity, antennal segment GO:0007420 brain development GO:0007409 axonogenesis GO:0007419 ventral cord development GO:0007424 open tracheal system development GO:0043565 sequence-specific DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007389 pattern specification process GO:0035288 anterior head segmentation GO:0014019 neuroblast development GO:0048813 dendrite morphogenesis |
InterPro families   | ND |
Orthology group | MCL30951 |
Nucleotide sequence:
ATGATGCCTCTCGCACCGACCCCTGTGGTGGCGGTGCCATCTAAACCGAAGATAGGATTC
AGTATCGACAGTATAGTCGGCGGGTCGGAGAGACCGAAGCAGTCATCGCCGCCGCTCGCG
AGCCCGGGTTCCCCGTCCCCGGTGGCGTCTCCGCGGAGTCCGTCTCCGCGACCCTTACTG
CGGCCGAGTGCTCTACCAGCTGTGTTCCCGTCGCCCGAGATCAAGAGGCTGCCGTATTTG
GACGCTCAGAGCCATCACCACCAGTTCCTGGCGCATTTCCAGGGCGCTGCGCTGGCGGCC
GCCTTGGCCCACCAGCAGCAGGGCTTCGGAGCTCCCCTCCCGCCCCACCCGCCGCCTCAC
CCCGCCGCTCCCGTGCCCAGGGAGTCATATCAGCTCTATCCCTGGCTCATCAACAGACAC
GGAAGGATATTCCCGCACAGATTCCCCGGCGGTGAGTGTATTTTTCTTGTTGGAATCTTA
AACGATTTTTATAAATTGTTTTGTTGTGGAGTCAGCTACTCAGATAATCAAATCTTTTGA
Protein sequence:
MMPLAPTPVVAVPSKPKIGFSIDSIVGGSERPKQSSPPLASPGSPSPVASPRSPSPRPLL
RPSALPAVFPSPEIKRLPYLDAQSHHHQFLAHFQGAALAAALAHQQQGFGAPLPPHPPPH
PAAPVPRESYQLYPWLINRHGRIFPHRFPGGECIFLVGILNDFYKLFCCGVSYSDNQIF