| New model in OGS2.0 | DPOGS211710 |
|---|---|
| Genomic Position | scaffold4755:- 4779-5090 |
| See gene structure | |
| CDS Length | 312 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 2 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008012 (1e-13) |
| Best Drosophila hit | ND |
| Best Human hit | tigger transposable element-derived protein 4 (1e-12) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Acyrthosiphon pisum] (6e-14) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Acyrthosiphon pisum] (9e-16) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0000775 chromosome, centromeric region GO:0003676 nucleic acid binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR009057 Homeodomain-like IPR004906 Pogo transposase / Cenp-B / PDC2, subgroup, DNA-binding HTH domain IPR012287 Homeodomain-related IPR006600 Pogo transposase / Cenp-B / PDC2, DNA-binding HTH domain |
| Orthology group | ND |
Nucleotide sequence:
ATGAAAATAAAAGACGTCGCAGCTCAATACGGATTTCCAGCAAGCGCTTTGTCTACAATA
ATTAAGAATGAAGCCGAAATATTGCAAAGGTATGAATCAAGTGGCAATTTGTCTAGCAAA
AGACCGCGTCTAGCTGAGTTTCCTGATGTAGAAGAATGCTTACTCACCTGGTTCAAACAG
TGTCGGGACAAAAACATAAGTGTATCTGGGCCTATCTTACGCGAAAAGGCAGAAGAATTT
TCAAAATCACTTGGGACACAGTTCTTTTCGTGCCAGCAACGGTTGGTTGGTGAATTTCAA
GAAGCGTCATGA
Protein sequence:
MKIKDVAAQYGFPASALSTIIKNEAEILQRYESSGNLSSKRPRLAEFPDVEECLLTWFKQ
CRDKNISVSGPILREKAEEFSKSLGTQFFSCQQRLVGEFQEAS