New model in OGS2.0 | DPOGS205497  |
---|---|
Genomic Position | scaffold792:+ 39184-56816 |
See gene structure | |
CDS Length | 4740 |
Paired RNAseq reads   | 12497 |
Single RNAseq reads   | 41624 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000128 (0.0) |
Best Drosophila hit   | twinstar (1e-69) |
Best Human hit | cofilin-1 (4e-09) |
Best NR hit (blastp)   | actin-depolymerizing factor 1 [Bombyx mori] (4e-78) |
Best NR hit (blastx)   | actin-depolymerizing factor 1 [Bombyx mori] (5e-77) |
GeneOntology terms    | GO:0003779 actin binding GO:0030042 actin filament depolymerization GO:0008585 female gonad development GO:0007298 border follicle cell migration GO:0007015 actin filament organization GO:0000910 cytokinesis GO:0000915 cytokinesis, actomyosin contractile ring assembly GO:0030041 actin filament polymerization GO:0007409 axonogenesis GO:0016319 mushroom body development GO:0001736 establishment of planar polarity GO:0042067 establishment of ommatidial planar polarity GO:0001737 establishment of imaginal disc-derived wing hair orientation GO:0035286 leg segmentation GO:0010591 regulation of lamellipodium assembly GO:0048749 compound eye development GO:0005875 microtubule associated complex |
InterPro families   | IPR002108 Actin-binding, cofilin/tropomyosin type |
Orthology group | MCL11337 |
Nucleotide sequence:
ATGTCGCAATATCCGCTAAATGAATTGAAGCGACGGCTACAAGATGACACACCATTGCCG
AAAAGATTGAAATTGGCAAGAAATGTTGTACAAACCCAGTATTTTCCAACAGCTCCAAAA
GAAAGAGTTATAGCCGATTGGCTTGACGATTTAATCAAAACTAATAAACTGAAAAGCAAG
GACTTATGTGAAGTTTTAAACTGGCTGAATAATGTGGATGATTTCACAAGTGAATTTAAA
AGTAAACTTATAAAGGTGGTGTCACAATACCTCCACAGGAACGTATTAGAAAATAATGAC
ATAGAAAATATCATAGCGTTCATGGATAACAGCAAAATGTCACCGCAACTAATTCTACAG
ATTGAAGATTTCCTGTTCATTGTTACAACTTTACTACAAAACCTACATAACGAAGAAAAT
TATACTCTCGTTGATAAAATACTAAATAATATTGTGAGATATTATAAGGATTCCAAAAAG
AAGTTGCAATTCATCATCGGATTCCTGGAAGGTGAACATTTAGAGACCATTTTTTGTTTC
CTTCACACCAAATCTCACTCTGCCGCAATAAGTTTATGCCAGAATGTATTGTTTCCATTG
AGTAAAAAGCAGATTTTCTCAAGTTTCCTAACAAATTTGATCAGAAAGGAGACCATTGAC
GACTTAATAGCCGAAAAAGGTGATAATATACAGATTGTATTGAAAATTATGAGTTCATTT
TTCACATTCCCAAAAGGAAGGACGGAGAAAGATCCAAAATTCTTATCTGACTTCATTTAT
GTTTTTACAAGTTGCTTTAGAAGCGAGAGTCAATTATGCTTCACATTCTACATCATGGCT
ACGAACGCTTTCAACATGGCTCAGAATTATATGGTGCCAGCGATGCGTATGCCGCCGATC
ACTTTTGATAACGACGACAAAGTAAAAAGGGGTTTATTCCTGAAAATGCTTGAAGCTCTC
CATTCGCAGGAGATCAGTTTATCTGTGCGTTTCACTGATACACTCGGTGAGAGAATGACT
CACATCGACATAAAGAAGACATTCGCGGCGTTCGTACAAGCGGTTATGTTAGGACAAATA
AAATTGCAAGGTAAACTCGATAAAGTCACCTTGCAGATATTAGAGGTGGCTTTAAAACTC
GATCCATCCATCGTAGAACAGAAAACTGAATTAATACTGCCGTACATAATGACATCCAAG
AAAAAGAAATCGGACATCTCGGAACAATACACGTCTATGATGAATTATTTCATAGAGACG
TTATTCAAACTCAGCCGGGGCGCGGAATTCGTTAACAAAATCATACCACACATAAAACTT
AGCTTAGAAGCCACTAATGTTGAGCAATTTGAGTTGAAACAGAAATTGAAGGAAGCTTTG
AATAACGGTGACAGTAGTGACAAAATTGAGGCGGCCATTTTGACGGGAAATGACATTTTG
CCGCCGGATTGTGTAGAACTGTATGGCAAGCTGAGTTCTGAATTAATGTTTCGACAAAAT
AAAGTTTTGTTGGTGTCATTACAAAAAGACTTCGAGGAGAACTGTCTTATGATGCTTGAA
GAGGGCTTCGTTAGCCCCTCTATAATAACACTATCAGAAGTACTGTCCGCCATCTTGTCA
AGCTTCTTTAGGCACAACAAAATGGCCGACCATACCGTTCCGCTTCCTGTCGCTGAGGAG
TTCTGGTCGACTTTCCAAGAATTTGAAAAACTATGCTTGAATAAGTTTGGTGAATGTGTG
TTGAAGTTGAACTATAATCCACCATTAGTTATGGCCTTTCTACAATTATGCCTAAACTTC
TCCCAATTAAAACTACTAAATTTAAAATACGGCAACACTAAGTTGAATTTAACTGGTAAC
ATTTTAATACCATTCATGAACACACAGAAGTGGTTAGACTTTATACCTAGGATTCAAGAA
GCTGAGAATATTTTAGTATGGGATCACTTGCAACTTATACAAACAATGGCTATGGAGATA
TTGAATACAAACTCAGAGCAAATCTCAGAAACAAAAACAAATATATTGAAAAATATATCA
AGCTACCCTCAAGTTGTGACAAACGATAATTACTTCACAAACACATTATACAGAAATCTG
AATAAGAGACAAACTAAGATACTAACGAAGGCTATATTAAAAAATTACTCCACAAATAAT
AATATAGGGATATTCAAAACGCATGCTGTTAGTAACAATAGAGAATTATTGCAGAGTATT
CTGTTGAAGGTCTCAAAAAACATAACAGATTGTATAGGAAATGTTGAAGTTTTGTCCGAA
GCGCTGAACAAAACTAACTTTGAAGTTAACTCGTTTGTTAAATGGGTAAATGTTAGAGAT
CTGTTTAAAAACGGCAACATTATAAATGAAGATGAAATTTCAAATAATATAGACATATTG
AGGCTGTTACAGATACATAATCTGAAGGAAAATTACCAACTGACAGCCATCTTGGTTTTG
TTGCTAGCCAAACATTATTGCCAGCATAAAAAACTTAAAAGAAACATAGATAGTATATTA
CACAGTATATACGAGTTGAGTCCGAAGTACCCGGATGTTTATAAAATATTCCAACCGGAT
GCTATTTTCGATTTCAATAACAACATAATTCTTGAACTATTGAGATTGAATATCAAAACT
ACGAAGGACACGCTGATCATGAAGAACGTAATTGAAATAGCCGTGAAAAAGGTCAAAACC
GATCCTGATGTGATCAAAAATATAGTAGAGATACTATTAAGAAATCACAAAACCAGCGAA
ATAAATAATTTAGTCAATTTCGATAATCCCGTGTTCGAAATAATTTGTTTGGCTCTACCG
GTTATAGCTAGGGAGAAGAAAAATATAACAACAAGCGCCTACAGATCGATATTGGCTGAT
TTGCAGGAAAAATTAAATACGGCCATGTTGGATTCGTTTAGAAATTTAAATTTTAATGAA
AATGTTGAAAATGAAAATAGTCACAACTCTATGTTAGCGTACTCTCTAACATTATTAAAG
TTCTGTGAAAGCAGTGAGATCAATGAGAAGGATGTGGATTGTATGTTGAGTGGATTGGAG
TACTATATTGATATAGCGATTAATTCACTACAAGAACCATCGTCGATAACCGAACACATT
GAGACATCGATCAACCTTATAAACATTACTCTGAGATATCTCAAGAGACTGACACTATTG
ATGAAAACCTCAAATAAGACGAACCTTCTTGCTGATACAGATAAATTCTACCATAGACTA
TGGGTTGCGATAACATGTAGATTGTCTATGGTTTTTGACAAGCGGCAAAAGAGAAGAATA
AGTAATAACTGTATCGACGAAATAGCTGTCATGTTAAAATTTCTAGCTGAATTGTCATCG
GTTGAATGCTTTTGCAACCATTTTGTTGGAGATTTATCTAAGTTAGCATTACTTAAGAAT
CCATCATTTATACTAAAGAATGACGAGATCACGAACAGTCAGATCACAGCCAGGAGAGTA
TACAAATATCTGTGGCAGAACTGTCTCAAAGCAAACATCATAGAGGCTAAATGTGTTGCA
ATGACAAAAATTATATTTAGATCGACAAAAAATATAAAACATTGGATATGGCAACACTAT
GATAATATTGTACAAAATGGTCCACATGAAGTTGTAGTCGATGATAGCATATGTGAATTG
TTGAGGAATGATCTTGATACACTCTGTGATGTTATTATGGCTGCCAAAAAGATAAACCTC
GACTACAAATTCCTGGATTCCATATTTGAGTTAGCGCATCTCTACCAATACCTGCTGGGA
TCGAACACCATCAACACCAAGTGTGTGATATCATGGAATTCATTTATCACACTGTTTGAG
GGATGCACCGTACTTTTGAACAACCTGCTATTGTCTAGAGAGGAAATGTTAGAGGATAGA
TGGCCATGTTACATGCAGTGTTATAAAACATTAATACTGTGTCTCTGTGAGAGAGCCAAA
ACCGAGGACGATACGGACATATCCATAGAACTTAAGCTAGCTGAAATGGCTCATAGCATC
GAGAAATTGACCCAATCTATTTGCAAGCGAAAAACTCACGTTTCTAGAATATCGGCGTAC
GCGGTAGCTGACATTTGCAGTTGGATGGAGAGTAATTTCCCGCCAAAAGTTATGCGCCAA
CGCTTAGAAAATACAGTTGCCATGTTAATACAAGTCTCTGATTCAACTTACGCTATGTCA
TTCTTAAAACGTGCTCTAGCCGGTTCCGATTCCCGTCTGCCGACTCCCAATAGGCAGACT
TCCGGTCCGTCCGGAAACCGTATACCATTGCGGGAGGCGTCTGGGGTGACAGTATCGGAC
GCTTGCAAGACTACGTACGAGGAAATCAAAAAGGATAAGAAGCATAGATACGTAGTTTTC
TACATCAGGGATGAGAAACAGATAGATGTTGAGACGGTGGGGGGTAGGAACGCCGAGTAC
GAGCAGTTCCTAGAGGACCTGCAGAAGGGAGGCACCGGGGAGTGCAGATATGGTCTGTTT
GATTTTGAGTATACGCATCAGTGTCAAGGCACATCGGAGGCCAGTAAGAAGCAGAAACTG
TTTTTGATGTCATGGTGCCCCGATACAGCCAAGGTTAAGAAGAAGATGTTGTACTCTAGC
TCATTCGACGCTTTAAAGAAGTCGTTGGTCGGTGTGCAGAAGTACATCCAGGCGACTGAT
CTGTCCGAAGCATCACAGGAGGCCGTCGAAGAGAAGCTGCGCGCCACCGACCGCCAGTAG
Protein sequence:
MSQYPLNELKRRLQDDTPLPKRLKLARNVVQTQYFPTAPKERVIADWLDDLIKTNKLKSK
DLCEVLNWLNNVDDFTSEFKSKLIKVVSQYLHRNVLENNDIENIIAFMDNSKMSPQLILQ
IEDFLFIVTTLLQNLHNEENYTLVDKILNNIVRYYKDSKKKLQFIIGFLEGEHLETIFCF
LHTKSHSAAISLCQNVLFPLSKKQIFSSFLTNLIRKETIDDLIAEKGDNIQIVLKIMSSF
FTFPKGRTEKDPKFLSDFIYVFTSCFRSESQLCFTFYIMATNAFNMAQNYMVPAMRMPPI
TFDNDDKVKRGLFLKMLEALHSQEISLSVRFTDTLGERMTHIDIKKTFAAFVQAVMLGQI
KLQGKLDKVTLQILEVALKLDPSIVEQKTELILPYIMTSKKKKSDISEQYTSMMNYFIET
LFKLSRGAEFVNKIIPHIKLSLEATNVEQFELKQKLKEALNNGDSSDKIEAAILTGNDIL
PPDCVELYGKLSSELMFRQNKVLLVSLQKDFEENCLMMLEEGFVSPSIITLSEVLSAILS
SFFRHNKMADHTVPLPVAEEFWSTFQEFEKLCLNKFGECVLKLNYNPPLVMAFLQLCLNF
SQLKLLNLKYGNTKLNLTGNILIPFMNTQKWLDFIPRIQEAENILVWDHLQLIQTMAMEI
LNTNSEQISETKTNILKNISSYPQVVTNDNYFTNTLYRNLNKRQTKILTKAILKNYSTNN
NIGIFKTHAVSNNRELLQSILLKVSKNITDCIGNVEVLSEALNKTNFEVNSFVKWVNVRD
LFKNGNIINEDEISNNIDILRLLQIHNLKENYQLTAILVLLLAKHYCQHKKLKRNIDSIL
HSIYELSPKYPDVYKIFQPDAIFDFNNNIILELLRLNIKTTKDTLIMKNVIEIAVKKVKT
DPDVIKNIVEILLRNHKTSEINNLVNFDNPVFEIICLALPVIAREKKNITTSAYRSILAD
LQEKLNTAMLDSFRNLNFNENVENENSHNSMLAYSLTLLKFCESSEINEKDVDCMLSGLE
YYIDIAINSLQEPSSITEHIETSINLINITLRYLKRLTLLMKTSNKTNLLADTDKFYHRL
WVAITCRLSMVFDKRQKRRISNNCIDEIAVMLKFLAELSSVECFCNHFVGDLSKLALLKN
PSFILKNDEITNSQITARRVYKYLWQNCLKANIIEAKCVAMTKIIFRSTKNIKHWIWQHY
DNIVQNGPHEVVVDDSICELLRNDLDTLCDVIMAAKKINLDYKFLDSIFELAHLYQYLLG
SNTINTKCVISWNSFITLFEGCTVLLNNLLLSREEMLEDRWPCYMQCYKTLILCLCERAK
TEDDTDISIELKLAEMAHSIEKLTQSICKRKTHVSRISAYAVADICSWMESNFPPKVMRQ
RLENTVAMLIQVSDSTYAMSFLKRALAGSDSRLPTPNRQTSGPSGNRIPLREASGVTVSD
ACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYEQFLEDLQKGGTGECRYGLF
DFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATD
LSEASQEAVEEKLRATDRQ