| New model in OGS2.0 | DPOGS205499 |
|---|---|
| Genomic Position | scaffold792:+ 62968-67273 |
| See gene structure | |
| CDS Length | 1098 |
| Paired RNAseq reads | 870 |
| Single RNAseq reads | 2098 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000130 (6e-97) |
| Best Drosophila hit | CG10307 (2e-38) |
| Best Human hit | leucine-rich repeat-containing protein 2 (1e-15) |
| Best NR hit (blastp) | GA10235 [Drosophila pseudoobscura pseudoobscura] (9e-51) |
| Best NR hit (blastx) | GJ21310 [Drosophila virilis] (2e-46) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL18828 |
Nucleotide sequence:
ATGAGTGCTATCTTAAAATTTATCCGTGAAAACCATATTTTGGCGGTAATAGAACAAGCT
ATCGCAAAGAAGAAGTCCCGTTTAAGTTTAAATTCGTTTGAAATTACCGAAATACCTGCA
CTTCTATACACTTGCCTTGATGTGGAACATCTTTATCTCCATATTAATAATATAACAACA
GTGCCAGTGCAGATCACTCAGCTGTTAAACTTGACTACTTTGACCCTCGATTATAACAAC
ATAAATTCATTGCCGGCGGAAATCGGTAACTTGAAAAATTTAGTTAACTTGAACATTAGT
TACAATCCTCTGAAAGTGTTGATACCTGAGATTGGAGAACTCGAAAACCTCGAGGCGTTC
TGGTGCAACAGGATACAATTGAAAGAATTGCCGAAGGAGATTGGAAAATTGTTGAAATTG
GACACATTGGGGGCCCGAGGTAATGAATTGAGGACAATTCCTGAAGAAATGACCAGGCTC
ACAAAGTTAAGATGGTTAACTTTAGAGCACAATCAGATAGAAACTTTGCCGTCGGGTATG
AGGAATATGGAATCGTTGGTTCACTGTAACCTTCGGCATAACAGGCTCAGAGAGTTTCCA
GACGACTTGTTGGAATGCAACGACTTGATGTTCTTGCAGCTAAATAATAATCAGATATCG
AGTTTACCGGAGGATTTCAATACAAATGCAATGCCAGTGCTGGAAATGATTGATCTGAGA
CACAACCCGATATGTCAATTGACACATTTGGAACATCCCTTAATCCGTTATACCGAAGAA
CTGCCAACAAGTGACATAATACAAGAGCTGCCGTCTTCAAGTAGTCGTGGTCACGTCGTG
CCTCACGGAGCCCAAGCGTTGGCGGTGAACGCGACGGCTCTTAGACTACCCGCGGTGCCC
GCGCCACGACATCCCGACCCGCTCATGATTGATATGGAGTTAGACGCGTCATCGATAGAA
TCATCAGAAGATTGGGAGAATAGCGTTAACAGCTCGGAACTGGATGTTCAGTATCAGAGC
GACGACGAACGCATCGACAACGAGGCGGTCGGCATGGTGCTGCCAGAACTATCGCGATAC
GCGTCCACTGCGAGCTAA
Protein sequence:
MSAILKFIRENHILAVIEQAIAKKKSRLSLNSFEITEIPALLYTCLDVEHLYLHINNITT
VPVQITQLLNLTTLTLDYNNINSLPAEIGNLKNLVNLNISYNPLKVLIPEIGELENLEAF
WCNRIQLKELPKEIGKLLKLDTLGARGNELRTIPEEMTRLTKLRWLTLEHNQIETLPSGM
RNMESLVHCNLRHNRLREFPDDLLECNDLMFLQLNNNQISSLPEDFNTNAMPVLEMIDLR
HNPICQLTHLEHPLIRYTEELPTSDIIQELPSSSSRGHVVPHGAQALAVNATALRLPAVP
APRHPDPLMIDMELDASSIESSEDWENSVNSSELDVQYQSDDERIDNEAVGMVLPELSRY
ASTAS