| New model in OGS2.0 | DPOGS207609 |
|---|---|
| Genomic Position | scaffold4365:- 430-1274 |
| See gene structure | |
| CDS Length | 561 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 81 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006526 (3e-40) |
| Best Drosophila hit | pitchoune, isoform A (4e-44) |
| Best Human hit | ATP-dependent RNA helicase DDX18 (4e-44) |
| Best NR hit (blastp) | ATP-dependent RNA helicase pitchoune, putative [Ixodes scapularis] (2e-46) |
| Best NR hit (blastx) | ATP-dependent RNA helicase pitchoune, putative [Ixodes scapularis] (2e-44) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0004004 ATP-dependent RNA helicase activity GO:0005524 ATP binding GO:0000166 nucleotide binding GO:0003723 RNA binding GO:0004386 helicase activity |
| InterPro families | IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014001 DEAD-like helicase IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site |
| Orthology group | ND |
Nucleotide sequence:
ATGGGATTTAAAACAATGACTGATATACAGGCTGAAGTTTTACCAAAGGCTTTAGACGGA
AAAGATGTAGTAGCAACTGCTAAAACTGGTTCTGGAAAAACTTTGGCATTCTTAATACCA
GTAGTGGAGTTAGTTTCTAGTCTTATAAAAGAACACCAGAAAGGAACTCTAGCTATAATA
GTATCACCAACAAGGGAACTAGCGATACAGACTTTCGCAGTACTACAAGAAATAATCACA
CATCATGAGTTAATGACTTCTCTATTAGTTATTGGCGGAGAAAACAGAAAAAAACAGAGC
TCTGAACTGTCAAAAGGTATCCACATAGTAGTTGCAACCCCTGGAAGATTATACGATCAT
ATGAGAACAAAAGAGTTTGACTATAGCAGTGTTAAGTGTCTGGTATTAGACGAGGCTGAT
AAAATATTCCAATTTGGTTTTGAAGAAGACATAAAGCAGATTGTTAATAGACTTCCAAGT
AAGATTCTTTACAAGCATTTTATCAGAAACTCGATAAATATGCTTCTATTTTTCTCTGCA
AGTAAATTGTTAGTTAACTAG
Protein sequence:
MGFKTMTDIQAEVLPKALDGKDVVATAKTGSGKTLAFLIPVVELVSSLIKEHQKGTLAII
VSPTRELAIQTFAVLQEIITHHELMTSLLVIGGENRKKQSSELSKGIHIVVATPGRLYDH
MRTKEFDYSSVKCLVLDEADKIFQFGFEEDIKQIVNRLPSKILYKHFIRNSINMLLFFSA
SKLLVN