DPGLEAN04254 in OGS1.0

New model in OGS2.0DPOGS207615 
Genomic Positionscaffold4365:+ 2244-4958
See gene structure
CDS Length1209
Paired RNAseq reads  576
Single RNAseq reads  1866
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA006357 (5e-64)
Best Drosophila hit  pitchoune, isoform A (3e-79)
Best Human hitATP-dependent RNA helicase DDX18 (2e-76)
Best NR hit (blastp)  PREDICTED: similar to RE48840p [Nasonia vitripennis] (3e-96)
Best NR hit (blastx)  DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus corporis] (3e-88)
GeneOntology terms




  
GO:0004004 ATP-dependent RNA helicase activity
GO:0003724 RNA helicase activity
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
InterPro families


  
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR014001 DEAD-like helicase
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
Orthology groupND

Nucleotide sequence:

ATGCCGACTCCGGACAAAATATTGATGAGGAAAATTAAAAAACGGGAAAAGAAAAAATTA
AAACTAATATCCAAAAAAGCCAATGCCGATCCGGACACCACAGAAAAAGCTAAAGGTGAC
GACTGTACTGAAAAAGAATTAAAGAGGCCCTCTGATAATAAGGAACAAAGCAATGGCGTA
ACCTCAAAAAAAAAGAAAAAGAAGCCTAAAGTTGAAGAAAAAATAGAGTCAGAGGAAATA
AAAGATGAACCAGATACAGATGGTGAGATGGATGAAGGTGGCCAAGAAGATGTTGAAAAC
AATGAAATTAAAACCAATGAGGAAAGTCAATTGCCAGGCTCCAGTTTATGTCTTGGAATT
TTGTCTGACCAGAAATTCACAGCACTTGAAGGAAAAATATGTGAAGCTACACTCATGGGT
ATCAAGGATATGGGTTTCACAACTATGACTGAGATACAAGCTAAGGCTATTCCACCGTTA
TTAGAAGGGAGAGATCTCGTTGGAGCAGCTAGAACCGGCTCAGGAAAAACGTTAGCCTTT
CTTATACCAGCTATTGATTTGATCTACAAATTGAAATTTAAACCTAGGAATGGTACTGGT
GTCATTATTTTGTCTCCAACTAGAGAGTTGTCAATGCAAACTTTTGGTGTTTTGATGGAA
TTGATGAAATACCATCATCACACTTACGGATTGGTCATGGGTGGCGCTAACAGAAGTACA
GAGGCACAGAAGCTTTCCAAAGGTATTAATATTCTGGTAGCAACACCTGGCAGGCTTTTA
GATCACCTACAAAACACACCAGACTTTTTGTACAAAAATTTACAGTGCCTTGTCATTGAT
GAAGCCGACCGAATACTTGAAATTGGATTTGAAGAGGAAGTTAAACAAATAATAAGATTA
TTGCCAACGACTATGGTAGCTGAATATCCACACGGCATTGAAGGGTTGGCGTTTATGGCG
AATATCCTTCCGTCGGGGAGTCGGTACATTTTGTTTGATGATAGCGTCTGCGGGTCCACC
CTGAACTTGAGTCCGCCTGTTGCCGCATTGACTGTGACGTCATTCTCAGTCATCTGTATA
ATATTTTCGGGTGAGAGGTCCGGCAGTGAACTTGACTGGCGGACGACAGGTGTGACCTTG
GGCGCCGCCACAGGTCCGGGTGTCATACACTGGACGTCATCATCGCCGGTGTCTTCAGTC
ACCTGCTAA

Protein sequence:

MPTPDKILMRKIKKREKKKLKLISKKANADPDTTEKAKGDDCTEKELKRPSDNKEQSNGV
TSKKKKKKPKVEEKIESEEIKDEPDTDGEMDEGGQEDVENNEIKTNEESQLPGSSLCLGI
LSDQKFTALEGKICEATLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAF
LIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRST
EAQKLSKGINILVATPGRLLDHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIRL
LPTTMVAEYPHGIEGLAFMANILPSGSRYILFDDSVCGSTLNLSPPVAALTVTSFSVICI
IFSGERSGSELDWRTTGVTLGAATGPGVIHWTSSSPVSSVTC