| New model in OGS2.0 | DPOGS213674 |
|---|---|
| Genomic Position | scaffold487:- 8137-12874 |
| See gene structure | |
| CDS Length | 1611 |
| Paired RNAseq reads | 3244 |
| Single RNAseq reads | 8148 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010666 (0.0) |
| Best Drosophila hit | CG5525 (0.0) |
| Best Human hit | T-complex protein 1 subunit delta (4e-174) |
| Best NR hit (blastp) | chaperonin subunit 4 delta [Bombyx mori] (0.0) |
| Best NR hit (blastx) | chaperonin subunit 4 delta [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0042623 ATPase activity, coupled GO:0005832 chaperonin-containing T-complex GO:0005524 ATP binding GO:0051082 unfolded protein binding GO:0006457 protein folding GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0031122 cytoplasmic microtubule organization GO:0005875 microtubule associated complex |
| InterPro families | IPR002423 Chaperonin Cpn60/TCP-1 IPR017998 Chaperone, tailless complex polypeptide 1 IPR012717 T-complex protein 1, delta subunit IPR002194 Chaperonin TCP-1, conserved site |
| Orthology group | MCL14309 |
Nucleotide sequence:
ATGGCTCCTAAAGCTGGTGGTGATTCTGCTAAAGTTAATTCTTCTGTATACAAAGATAAA
AGTAAACCTACAGATATTCGTCTGAGTAATATAAATGCCGCAAAAGCTGTCTCAGATGCA
ATTCGGACAAGTCTTGGCCCTAGAGGCATGGACAAAATGATTCAAGCTGCAAACGGAGAA
GTGACCATTACAAATGATGGAGCAACTATTTTGAAACAAATGAGTGTTATTCATCCAGCA
GCTAAAATGTTAGTTGAACTATCGAGAGCTCAAGATATAGAAGCTGGCGATGGTACAACA
TCAGTGGTTGTGATCGCTGGAGCACTGCTTGACGCTGCTGAGAAGCTGTTACAAAAGGGA
ATTCACCCCACTGTTATATCCGACGGCTTCCAGAAGGCTTTACAGATGGCCCTACAGGTT
ATAGAAGGAATGTCAACTCCAGTTGATTTAAGCAATGAAGATGCACTTTTGAAGGCTGCT
GCTACTTCTTTGAACTCTAAAGTGGTTTCACAGCATTCCACCATATTAGCTCCAATCGCT
GTTCAGGCCATCCGTGCAGTAATGGAACCAGTTCCGAACGGCGTTGGCGCACGTGTGGAT
CTCCGCGATGTGAAGGTGATTGAACGTATTGGTGGAACAGTGGAAGACACTGAGCTTGTC
CAAGGACTGGTCATTCCTCACAGAGCCTCCAACGTGAATGGACCTCACCGCATTGAGAAG
GCTAAAGTGGGCCTCATACAGTTCTGCATCTCACCACCAAAAACTGATATGGACCACAAT
GTTATTGTATCGGACTATGCTGCTATGGATCGCGTGTTGAAGGAAGAACGCCAGTACATA
TTGAATATTGTGAAGCAGATCAAAAAAGCCGGCTGTAATGTGTTGTTGGTTCAGAAGTCA
ATTTTAAGAGATGCTCTCAGCGACCTGGCCATTCATTTCTTGGACAAAATCAAAACTATG
GTTATCAAGGATATTGAGCGTGAAGATATTGAGTTTGTGTGCAAAACTCTTGGATGCCGT
CCCATTGCTTCCTTGGATCATTTCACAGCTGAAAATCTTGTCAACGTAGACCTTGTAGAG
GAAGTGAACGAGCCATCCGGGAAGTACATCAAGATGACAGGCTGCGCCGGGGGTGGCAAG
ACCGTGTCGGTTTTAGTCCGCGGTACATCTTCCGCTGTGGTTGCGGAGGCGGCTCGTTCG
TTGCACGATGCTCTGTGTGCTGTCCGCTGTGTCGCTCGCCGTCCAGCCCTGTTGCCGGGC
GGTGGCGCTCCAGAGGCCGCCGCGGCCGCTGCTTTGGCTCGAGCAGCCATCGCAGCCCCC
GGGGCTGATCACTACTGCCTCAGAGCGTACTCGGATGCCCTGGAGGTTATACCCTCCACA
CTCGCAGAAAATGCAGGTCTGAACCCTATCGAGACGGTGACGGAGCTGCGTGCCGCTCAC
GCGTCCGCGTCCTGTGCCGGCTCCGGCGTGAATGTCCGCCGTGGTCGCGTCACTGACATG
AGGCACGAGAACGTCTTGCAACCGCTGCACGTGACGTCATCCGCTCTGGGACTCGCCACT
GAGACTGTGCGGGCTATACTCAAGATTGACGACATTGTGAGTTATACTTAA
Protein sequence:
MAPKAGGDSAKVNSSVYKDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQAANGE
VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDAAEKLLQKG
IHPTVISDGFQKALQMALQVIEGMSTPVDLSNEDALLKAAATSLNSKVVSQHSTILAPIA
VQAIRAVMEPVPNGVGARVDLRDVKVIERIGGTVEDTELVQGLVIPHRASNVNGPHRIEK
AKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKS
ILRDALSDLAIHFLDKIKTMVIKDIEREDIEFVCKTLGCRPIASLDHFTAENLVNVDLVE
EVNEPSGKYIKMTGCAGGGKTVSVLVRGTSSAVVAEAARSLHDALCAVRCVARRPALLPG
GGAPEAAAAAALARAAIAAPGADHYCLRAYSDALEVIPSTLAENAGLNPIETVTELRAAH
ASASCAGSGVNVRRGRVTDMRHENVLQPLHVTSSALGLATETVRAILKIDDIVSYT