| New model in OGS2.0 | DPOGS213698 |
|---|---|
| Genomic Position | scaffold487:+ 45978-46899 |
| See gene structure | |
| CDS Length | 645 |
| Paired RNAseq reads | 633 |
| Single RNAseq reads | 2117 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010671 (4e-114) |
| Best Drosophila hit | CG10306 (2e-64) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit K (3e-66) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit K [Bombyx mori] (2e-115) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit K [Bombyx mori] (1e-112) |
| GeneOntology terms | GO:0005515 protein binding GO:0003743 translation initiation factor activity GO:0006413 translational initiation GO:0005852 eukaryotic translation initiation factor 3 complex GO:0005737 cytoplasm GO:0005634 nucleus GO:0005829 cytosol GO:0043022 ribosome binding GO:0006446 regulation of translational initiation |
| InterPro families | IPR016024 Armadillo-type fold IPR019280 COP9 signalosome, subunit CSN8 IPR016020 Translation initiation factor 3, subunit 12, N-terminal, eukaryotic IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR009374 Translation initiation factor 3, subunit 12, eukaryotic |
| Orthology group | MCL13705 |
Nucleotide sequence:
ATGGCAGAAACCATGAGACAAACTGTGGCTTCAATTTTGAAAAGTATCGAGAGATATAAC
CCAGCCAATCTTCAGACACTCGAACGATACGTTGAGTTACAATCAAGGGAGAATACATAC
GATTTAGAAGCAAATTTAGCGGTTCTGAAACTTTATCAGTTCAATCCAGAAAGGTTCAAC
CCTGACATAACGTGCCAGATACTTTTAAAGGCACTTACAAATTTCCCTCACACCGACTTT
ACATTGTGCAAGTGTCTGCTTTTAGAATCTGTAGTGGAAAACGAGACCATTTCCCAAATA
AAGTATCTGGCTGATATTCTTGAGCAATGCGATTTTGCCCAGTTCTGGAACAGAGTACAC
CAAATGCCGGAACTGTGTAACCGTATCAGCAGCTTCCATGATTCCATTCGCAAGTTTGTT
TGTCATGTTGTCGGCATTACTTTCCAGACTATTGACAAGAATAACCTTGCTAACTTGTTA
GGTGGAATCGATGATGTGACCCTGAAGCACTGGGTTAAAAAATATGGTTGGAAGGATGAG
GGTAACCTTATCTTCATCGCAAATCAAGATGAGAACATCAAGACTAAGAATATTACAGAG
AAAATTGAATTTGATCATCTCGCTCCCTTAATGGCAATTTTGTAA
Protein sequence:
MAETMRQTVASILKSIERYNPANLQTLERYVELQSRENTYDLEANLAVLKLYQFNPERFN
PDITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH
QMPELCNRISSFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGWKDE
GNLIFIANQDENIKTKNITEKIEFDHLAPLMAIL