DPGLEAN04281 in OGS1.0

New model in OGS2.0DPOGS204923 
Genomic Positionscaffold5819:+ 252-7620
See gene structure
CDS Length1800
Paired RNAseq reads  1563
Single RNAseq reads  5387
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA010725 (0.0)
Best Drosophila hit  alpha-coatomer protein, isoform A (0.0)
Best Human hitcoatomer subunit alpha isoform 2 (0.0)
Best NR hit (blastp)  coatomer protein complex subunit alpha [Bombyx mori] (0.0)
Best NR hit (blastx)  coatomer protein complex subunit alpha [Bombyx mori] (0.0)
GeneOntology terms






  
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
GO:0030126 COPI vesicle coat
GO:0016192 vesicle-mediated transport
GO:0005515 protein binding
GO:0005198 structural molecule activity
GO:0006886 intracellular protein transport
GO:0006911 phagocytosis, engulfment
GO:0010883 regulation of lipid storage
InterPro families







  
IPR011046 WD40 repeat-like-containing domain
IPR020472 G-protein beta WD-40 repeat
IPR006692 Coatomer, WD associated region
IPR019781 WD40 repeat, subgroup
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain
IPR019782 WD40 repeat 2
IPR017986 WD40-repeat-containing domain
IPR019775 WD40 repeat, conserved site
Orthology groupMCL12146

Nucleotide sequence:

ATGTGTGCACAGTTTCATCCCACCGAAGATCTTCTAGTGTCAGCTTCGTTGGACCAATCT
GTTAGAGTCTGGGACTTCTCTGGGCTGAGGAAGAAGAGTGTGGCACCGGGACCCACAGGG
CTAGCCGATCATCTCAGGAATCCACAAGCTACGGACCTCTTTGGACAGGCGGATGCAGTT
GTAAAGCATGTGTTGGAAGGGCATGATCGCGGAGTGAACTGGGCGTCTTTCCATCCAAAC
CTCCCGCTCATAGTGTCCGCAGCTGATGATAGACAAGTCAAACTGTGGCGGATGAACGAT
GCCAAGGCTTGGGAGGTAGACACGTGTCGCGGGCACTACAACAACGTGTCATGTGCGCTG
TTCCACGCTAGACACGAGCTGATACTGTCGAATAGTGAGGATAAATCCATCAGGGTCTGG
GATATGACGAAGCGTGTCTGTTTGCACACCTTCAGGAGAGAACACGAACGCTATTGGGTG
CTATCATCACATCCGACCCTCAACCTATTTGCCGCTGGTCACGACGCTGGTATGATATTG
TTCAAACTTCAACGAGAAAGACCAGCATATGCCATACATAATAATATGCTCTTCTATATT
AAGGACAGACAGCTTCGTAAACTGGATATGTCAACTAATAGAGATGCCCCGGTTATGCAG
ATCAAGGGTGGCGGAAGACATCAACCTTACAGTATGTCGCTGAATCACGCTGAGTGGTGC
GTGCTTGTGTCGTGGCGTGTTGGTGACACGCATACGTACGAACTATACAACGTTTCGAGA
GACGGTGAGGCTGCGAGTACCGCTGAGCCAATGAGGGGACACGCTACTACGGCTGTGTGG
GTCGCTAGGAATAGATTTGCTGTATTGGAGAAGAACAATCAGCTGATAATAAAGAATCTG
AAGAACGAGGTGTCCAAGAAGATAGCGACTCCGACGTGTGAGGAGATCATGTACGCCGGT
ACTGGGATGCTGTTACTCAGGGAGGTCGATGCTGTGCAGCTCCTGGACGTGCAGCAGAAG
AGGACCGTGGCCAGTGTGAAAGTATCCAAATGCCGTTACGCTATTTGGAACTCGGATATG
TCGCTAGTGGCGCTCCTTGGGAAGCATACGGTGACGATATGTACCAAGAAGCTAGAACAG
CTGTGCTCTATCACCGAAGGGGCGCGGGTCAAGTCGGGGGCGTTTGATGATTCAAATTCA
CACCCAGTCTTCATATACACGACGGCCAATCACATCAAATATTGCTGCAAAGAAGGAGAT
CACGGGATTATCCGTACGTTGGATGTGCCGGTGTATGCGGTGAAGGTGATAGCGAACGAA
GCTGGGGCGAGAGTTGTATGTCTCGATAGAGAGGCCCGTCCCAAAGTACTCAACATTGAC
CCCACAGAATACAGAGTTTTGAAGAAAACAGAAGAATGCTATCCAGAAGTAGCGCTTCAC
TTCGTGAAGGATGCCCGGACGAGGTTGGAATTGTCACTACAGTGTGGTAACATAGAAGTG
GCTTTGGAAGCTGCTAAGAGTTTGGACGATCCTGATGCATGGGAGAAACTCGCTGATGCG
GCGAGAAACGCCGGAAACCATCAGATTGTTGAGATGTGCTACCAGCGTACAAAGAACTTT
GACAAGCTCTCGTTCCTGTACCTCATCACCGGCAACCTTGACAAGTTGAGGAAGATGATG
AAAATAGCGGAGATAAGAAAAGATGTCTCCTCACAGTTCCAAGGAGCGCTGCTGTTAGGA
GATGTGGCTGAGAGAATAAGGCTGTTGAAAAACGCTGGACAGGTCTATGGAACTAAATAA

Protein sequence:

MCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPTGLADHLRNPQATDLFGQADAV
VKHVLEGHDRGVNWASFHPNLPLIVSAADDRQVKLWRMNDAKAWEVDTCRGHYNNVSCAL
FHARHELILSNSEDKSIRVWDMTKRVCLHTFRREHERYWVLSSHPTLNLFAAGHDAGMIL
FKLQRERPAYAIHNNMLFYIKDRQLRKLDMSTNRDAPVMQIKGGGRHQPYSMSLNHAEWC
VLVSWRVGDTHTYELYNVSRDGEAASTAEPMRGHATTAVWVARNRFAVLEKNNQLIIKNL
KNEVSKKIATPTCEEIMYAGTGMLLLREVDAVQLLDVQQKRTVASVKVSKCRYAIWNSDM
SLVALLGKHTVTICTKKLEQLCSITEGARVKSGAFDDSNSHPVFIYTTANHIKYCCKEGD
HGIIRTLDVPVYAVKVIANEAGARVVCLDREARPKVLNIDPTEYRVLKKTEECYPEVALH
FVKDARTRLELSLQCGNIEVALEAAKSLDDPDAWEKLADAARNAGNHQIVEMCYQRTKNF
DKLSFLYLITGNLDKLRKMMKIAEIRKDVSSQFQGALLLGDVAERIRLLKNAGQVYGTK