| New model in OGS2.0 | DPOGS207609 |
|---|---|
| Genomic Position | scaffold240:- 198917-200208 |
| See gene structure | |
| CDS Length | 612 |
| Paired RNAseq reads | 77 |
| Single RNAseq reads | 224 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006526 (4e-50) |
| Best Drosophila hit | pitchoune, isoform A (4e-49) |
| Best Human hit | ATP-dependent RNA helicase DDX18 (4e-47) |
| Best NR hit (blastp) | PREDICTED: similar to pitchoune CG6375-PB, isoform B [Apis mellifera] (9e-52) |
| Best NR hit (blastx) | PREDICTED: similar to pitchoune CG6375-PB, isoform B [Apis mellifera] (3e-49) |
| GeneOntology terms | GO:0004004 ATP-dependent RNA helicase activity GO:0003724 RNA helicase activity GO:0005634 nucleus GO:0005730 nucleolus GO:0003676 nucleic acid binding GO:0005524 ATP binding |
| InterPro families | IPR001650 Helicase, C-terminal |
| Orthology group | MCL40080 |
Nucleotide sequence:
ATGTCGGTGCTTTGTATACATGGAAAAATGAACCAGTCAGACAGAACTGACACTATAAAC
AAATTTTATAATGCACAAAAAATGGCCTTGTTTTGCACAGATTTAGCTGCAAGAGGACTG
GACATACCAGAAGTTAATTGGATTGTTCAGTTTGATCCACCTGCTGATACTAATGAATAT
ATTCATAGAGTTGGCAGAACAGCGAGAGGTTTAGGTGCTGAGGGACGAGCAGTATTGTTA
TTGAGACCAGAAGAGAGTGAATTTGTTAATTATTTGCGAAATGCTAAAATCTATTTAGAC
AAATATGAATTATGGAATAAGTACAGCGATCTGCAGTCTAAGATAGAGGTCGCTATGAAA
GACTCGGAATTCCATAATCTTGCAATCGAAGCTTTTGAAGGATATACAAGGGCATTTGAA
GTGAAGAAATTAAAACATGTCTTTAATTTACTGAATATGGATTTAGATAGTGTAGCGAAA
TCGTTTGGTTTAAAAGAGAAGCCAGATGTTGATATTCGTGTGGGTTTTAACAAAAAACAT
AGACCTAGGAAGAGAATGGCTGCGATGTTGGCTAAAAATAATACAGCACCTATGAAATTG
TTAAAAACGTAG
Protein sequence:
MSVLCIHGKMNQSDRTDTINKFYNAQKMALFCTDLAARGLDIPEVNWIVQFDPPADTNEY
IHRVGRTARGLGAEGRAVLLLRPEESEFVNYLRNAKIYLDKYELWNKYSDLQSKIEVAMK
DSEFHNLAIEAFEGYTRAFEVKKLKHVFNLLNMDLDSVAKSFGLKEKPDVDIRVGFNKKH
RPRKRMAAMLAKNNTAPMKLLKT