| New model in OGS2.0 | DPOGS207613 |
|---|---|
| Genomic Position | scaffold240:+ 66328-79779 |
| See gene structure | |
| CDS Length | 717 |
| Paired RNAseq reads | 38 |
| Single RNAseq reads | 115 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006354 (5e-60) |
| Best Drosophila hit | CG40378 (6e-43) |
| Best Human hit | neurotrimin isoform 3 (1e-17) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010860 [Tribolium castaneum] (1e-66) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010860 [Tribolium castaneum] (5e-65) |
| GeneOntology terms | GO:0008150 biological_process GO:0003674 molecular_function GO:0005575 cellular_component |
| InterPro families | IPR013098 Immunoglobulin I-set IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR003596 Immunoglobulin V-set, subgroup IPR013783 Immunoglobulin-like fold IPR007110 Immunoglobulin-like IPR003006 Immunoglobulin/major histocompatibility complex, conserved site |
| Orthology group | MCL40062 |
Nucleotide sequence:
ATGCTTTCACCGTCGACAAAAGCGGCCTGCTGGCTGACGACGTTCCTTAGCGTCTTTGTG
ACAGGTGAAATGCCAATACAAGCCGAAGTGGGACCTGAATTTTTGCAAGCGCTTGAAAAC
CACACCGTCACGCAAGGCCGGGATGTACACTTTACCTGTGTTGTCAATCATCTTTCCAAT
TACAGAGTTGCATGGATAAAATCAGATTCAAAAGCAATTCTTGCGATACATACAAACATG
GTTGCATTGAATCCTCGTCTGTCTGTCACCTACAATAACCACAATACATGGAAACTTCAC
GTCAGTAATGTCCAAGCGAACGACTCTGGAACTTATATGTGTCAAGTTAACACAGACCCT
ATGAAGAGTCAGATGGGTCACCTGTCCGTGGTAATACCTCCGGATATCGATGATTCGATA
GCTGAAGGCAGCTCAGCCAGAGAAGGTGGTAGTATTCGTCTCACTTGTACTGCAACTGGA
GTTCCACCACCCACAGTGATGTGGCGAAGAGAGCACAACCGACCTATCGTATTCAGACAT
GACGGAGGAAGAGAGAAGAAGGTAACTGAGTCGTCGTCCCTAGCATATATGAGCGTCTGG
ACGGTGGCTACGGAGAGGACTGAGGGGACTGAGGGGGAGGGAGGCAGACGCGAGTGCTAT
AATACACGCGAATTGTATATACAACAGACAGTTCTGAAGATATGTGACGTCATATGA
Protein sequence:
MLSPSTKAACWLTTFLSVFVTGEMPIQAEVGPEFLQALENHTVTQGRDVHFTCVVNHLSN
YRVAWIKSDSKAILAIHTNMVALNPRLSVTYNNHNTWKLHVSNVQANDSGTYMCQVNTDP
MKSQMGHLSVVIPPDIDDSIAEGSSAREGGSIRLTCTATGVPPPTVMWRREHNRPIVFRH
DGGREKKVTESSSLAYMSVWTVATERTEGTEGEGGRRECYNTRELYIQQTVLKICDVI