| New model in OGS2.0 | DPOGS207617 |
|---|---|
| Genomic Position | scaffold240:+ 216283-219962 |
| See gene structure | |
| CDS Length | 1509 |
| Paired RNAseq reads | 581 |
| Single RNAseq reads | 1459 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006358 (0.0) |
| Best Drosophila hit | noisette (0.0) |
| Best Human hit | splicing factor 3A subunit 3 (0.0) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005515 protein binding GO:0005622 intracellular GO:0005634 nucleus GO:0005681 spliceosomal complex GO:0006397 mRNA processing GO:0008270 zinc ion binding |
| InterPro families | IPR000690 Zinc finger, C2H2-type matrin IPR021966 Splicing factor SF3a60 binding domain |
| Orthology group | MCL12107 |
Nucleotide sequence:
ATGGAAACAATACTGGAACAACAGAGGAGTTATCATGAAGAACGAGAACGTACTATGGAT
GCTATGGTGAAGGAAATTCTAAATAAAAAAACGGGACATCGCGAAACAATCAACGCTGAT
CACCGATTGAAAAATTTACACGATCGGTATATAGAATCTTCTATAAGATTGAAAGAGTTA
TATGAGGACAAAGATGGAATCCGTAAAGAAGAAATAGCGGCATTATCAGGACCAAATGAG
TTTCAAGAATTTTATGCAAGACTTAAACAAATTAAAGAATTTCACAGAAAACATCCTAAT
GAGATCTGTGTTCCCATGTCAGTGGAATTTGAAGAGTTAGCTAAGATTAGGGAAAACCCT
TCAGAGGATTACACAACTCCTGTTGAATTTACTGATGAAGAAGGATATGGAAAATACCTG
GATTTGCACGAGTGTTATGAAAAGTATATTAACTTGAAGGGAATAGAGAAAATCGATTAC
ATAACATACCTGAGTATTTTCGACCACTTGTTTGATATACCGAGGGAGCGTAAAAACAGT
GACTATAGGAACTATATAAGAGCATTACTGACTTACTTGAAGGATTTTGTCAATAGAGTG
AAACCATTGATGGATCAAGCACAGGAAATGGCTACAGCACATCAAGATTTCTTGAAGCAA
TGGGAATCTGGAACATTTCCTGGTTGGCCAAAAGAAACTGGAGGAGCACTTACAAATGTA
GGAGCTCATTTAGATTTATCAGCTTTTTCATCTTGGGAAGAGCTTGCGTCTCTTGGACTA
GATAGATTGAAGTCTGCTCTAATGGCTCTTGGTTTAAAGTGTGGTGGAACTTTAGAAGAA
AGAGCACAAAGATTGTTTAGTACAAAAGGTCAAACAGCCCTTGATAAGTCATTGGTAGCT
AAAAAAGGCGGGAACAAGGCTAAGGCTTCTACTCTTCAGCGTCACAAAGATATAGCTGCT
ATAGAAGCTCAAGTGTACCGGTTCTCAAACATAGTAAGCAGCACAAGAGCGTCTACAATT
GAAAATGTGACACGTAGAGCAGCCAGAGCTGCTGGTGAACGTCGAGATGAGAGTGATGAA
GAAAGTGAGGGTTCGGTTGCAGCAGACTTGGATTCCGATGATGATGAAGTGCCATATAAT
CCCAAGAATTTACCACTAGGGTGGGACGGAAAGCCAATTCCATACTGGTTATACAAGTTG
CATGGGCTAAACATTAGTTATTCCTGCGAGATTTGTGGTAACTACACGTACAAGGGTCCG
AAGGCTTTCCAACGTCACTTTGCGGAGTGGCGTCATGCTCACGGCATGAGATGTCTTGGT
ATACCGAATACTGCCCACTTTGCTAATGTCACTCAAATAGAAGATGCGCTTGCTTTGTGG
GAAAAAATCAAAAATCAAAAGGAAAATGAAAGATTTGTGGCTGAAAATGATGAAGAATTT
GAAGATTCACAGGGAAATGTTGTAAATCGAAAAACATATGAAGACTTGAAACGACAAGGT
CTTCTCTGA
Protein sequence:
METILEQQRSYHEERERTMDAMVKEILNKKTGHRETINADHRLKNLHDRYIESSIRLKEL
YEDKDGIRKEEIAALSGPNEFQEFYARLKQIKEFHRKHPNEICVPMSVEFEELAKIRENP
SEDYTTPVEFTDEEGYGKYLDLHECYEKYINLKGIEKIDYITYLSIFDHLFDIPRERKNS
DYRNYIRALLTYLKDFVNRVKPLMDQAQEMATAHQDFLKQWESGTFPGWPKETGGALTNV
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQTALDKSLVA
KKGGNKAKASTLQRHKDIAAIEAQVYRFSNIVSSTRASTIENVTRRAARAAGERRDESDE
ESEGSVAADLDSDDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYSCEICGNYTYKGP
KAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKNQKENERFVAENDEEF
EDSQGNVVNRKTYEDLKRQGLL