| New model in OGS2.0 | DPOGS201224 |
|---|---|
| Genomic Position | scaffold36:- 211004-237258 |
| See gene structure | |
| CDS Length | 1398 |
| Paired RNAseq reads | 2055 |
| Single RNAseq reads | 6566 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008001 (2e-156) |
| Best Drosophila hit | amphiphysin (1e-96) |
| Best Human hit | myc box-dependent-interacting protein 1 isoform 5 (4e-48) |
| Best NR hit (blastp) | PREDICTED: similar to bridging integrator [Tribolium castaneum] (7e-147) |
| Best NR hit (blastx) | PREDICTED: similar to bridging integrator [Tribolium castaneum] (3e-133) |
| GeneOntology terms | GO:0048488 synaptic vesicle endocytosis GO:0007269 neurotransmitter secretion GO:0006897 endocytosis GO:0005886 plasma membrane GO:0008104 protein localization GO:0045313 rhabdomere membrane biogenesis GO:0042052 rhabdomere development GO:0045202 synapse GO:0006937 regulation of muscle contraction GO:0006887 exocytosis GO:0005737 cytoplasm GO:0005515 protein binding |
| InterPro families | IPR003005 Amphiphysin IPR001452 Src homology-3 domain IPR004148 BAR |
| Orthology group | MCL13711 |
Nucleotide sequence:
ATGGCAGAAAGTAAAGGTGCGTTAATAGCGAAATCAGTGCAAAAACATGCCGGACGGGCG
AAGGAGAAGCTGCTCCAAAATTTGGGCAAAGTGGATCGGACCCTCGACGACATCTTCGAA
GAGCATCTCCAGAACTTCAACCGTCAACATCAACAGGCCACGAGGCTGCAGAAGGAATTC
AATAATTACATACGATGCATACGAGCTGTGCAAACACGTAGCTTCAGAGACTACCTCCGG
ATCACGGAGGTGTACGAGAGCAGCTGGTCGGGTCACGACCTGCTGTACGTACAGGCACAG
AACATGGAGATGCTGTGGCAGGACTTCTCACACAAACTGGGCGACCAGGTCCTCATACCG
CTCAACACTTATACCAACCAGTTCCCTGAAGTCAGGAAAAAGATCGAGAAACGTGGCAGG
AAGCTGGTGGACTACGACAGTCAGAGACACAGTTTCCAAAATTTGCAAGCGAATGCCGCC
AAAAGACGCGACGACGTCAAGGTACATAAATCACGCCGCGAACAGCTAGAGGAGGCCAAG
CGTACGTACGAGGTGCTGAACTCTGAGCTGCACGACGAGCTGCCCGCGTTGCACGACTCG
CGGGTTCTGTTCTACGTCCACAACCTACAGACGCTCTTCAGCGCTGAACAACTCTTCCAC
GCCGAGTCGTCCAAGGTGTTCGCCGAGTTGGAGGCGATCACGGATAAGTTGGCGACGGAG
AGTCAGAGAGGATCGTACAGGAGCCGACCCGCAGCTAACGGAGCACACGTCGTACAGACG
CCCTCCCCAGCGTTGAACGGAGACTCGCCACCCGACTCCCCCGAAACCCCCAACACCCCC
AAGACCTCCAACACCCCCAGCACTCCAAAGACCTCCAACACCCCCACGCCGGACGCGCCC
GCCCGCCGCGAGCACTCGTCGCCCCCGGACTCACCGGCCAAAGCAGTCAACTCGGTCAAT
TCCGTAAACCCCGTTAACTCTGTTAACTCCGTTAACGCCAACGTTAACGCGAACGAGGAC
AAGAAGGTCGAAGAACTATATGACATACCCGTCGGGGCCGAGAACGAGAGCGTCAATAAT
AACGACGAGGAAAAGAGACAGATAGACAAAGACGAAGAAAAGATTACGGAGAAGAAAGAG
ACGGATATAGTTAAGACGGACGAAGTGTACGATATCCCAGTCGGAGCCACGCTGGCGCCG
GGCGCGCTGTACCGCGTGAGGGCTACCTACAGGTACACCAGGGAGGACAGCGACGAACTG
TCCTTCGACGTCGGAGACATCATACGAGTCGTGGAGTACGACGACCCTGACGAACAGGAG
GAGGGCTGGCTGATGGGCATCAAGGAGTCCACCAACGAGAAGGGCATGTTCCCCGCTAAC
TTCACCAGGCCGATATGA
Protein sequence:
MAESKGALIAKSVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQATRLQKEF
NNYIRCIRAVQTRSFRDYLRITEVYESSWSGHDLLYVQAQNMEMLWQDFSHKLGDQVLIP
LNTYTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVHKSRREQLEEAK
RTYEVLNSELHDELPALHDSRVLFYVHNLQTLFSAEQLFHAESSKVFAELEAITDKLATE
SQRGSYRSRPAANGAHVVQTPSPALNGDSPPDSPETPNTPKTSNTPSTPKTSNTPTPDAP
ARREHSSPPDSPAKAVNSVNSVNPVNSVNSVNANVNANEDKKVEELYDIPVGAENESVNN
NDEEKRQIDKDEEKITEKKETDIVKTDEVYDIPVGATLAPGALYRVRATYRYTREDSDEL
SFDVGDIIRVVEYDDPDEQEEGWLMGIKESTNEKGMFPANFTRPI